Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   ACKTSN_RS20685 Genome accession   NZ_CP176503
Coordinates   4356191..4357315 (+) Length   374 a.a.
NCBI ID   WP_129799466.1    Uniprot ID   -
Organism   Streptomyces sp. HC307     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4351191..4362315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKTSN_RS20670 (ACKTSN_20670) - 4351891..4352646 (+) 756 WP_374329546.1 hypothetical protein -
  ACKTSN_RS20675 (ACKTSN_20675) - 4352709..4354457 (-) 1749 WP_409470468.1 BACON domain-containing protein -
  ACKTSN_RS20680 (ACKTSN_20680) radA 4354701..4356110 (+) 1410 WP_409470469.1 DNA repair protein RadA Machinery gene
  ACKTSN_RS20685 (ACKTSN_20685) disA 4356191..4357315 (+) 1125 WP_129799466.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  ACKTSN_RS20690 (ACKTSN_20690) - 4357444..4358289 (-) 846 WP_409470470.1 hypothetical protein -
  ACKTSN_RS20695 (ACKTSN_20695) - 4358668..4359603 (+) 936 WP_409470471.1 A/G-specific adenine glycosylase -
  ACKTSN_RS20700 (ACKTSN_20700) - 4359860..4360408 (+) 549 WP_409470472.1 SigE family RNA polymerase sigma factor -
  ACKTSN_RS20705 (ACKTSN_20705) - 4360444..4361115 (+) 672 WP_409470473.1 hypothetical protein -
  ACKTSN_RS20710 (ACKTSN_20710) cseB 4361169..4361879 (+) 711 WP_224737722.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40004.77 Da        Isoelectric Point: 4.8540

>NTDB_id=967282 ACKTSN_RS20685 WP_129799466.1 4356191..4357315(+) (disA) [Streptomyces sp. HC307]
MAANDRAAAPGKSGGSAGSDGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALAELDALTHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVEGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=967282 ACKTSN_RS20685 WP_129799466.1 4356191..4357315(+) (disA) [Streptomyces sp. HC307]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAATCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCTCCGGGCACGGCCCTGCGCGACGGGCTCGAGCGGGTCCTGCGCGGCAACACCGGCGGGCTGATCGTGC
TCGGCTCCGACAAGACCGTCGAGGCCATGTGCACGGGCGGTTTCGTGCTGGATGTCGAGTTCACGGCGACCCGGCTGCGT
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTCTCCTCCGACCTGTCGAAGATCCTGCGTGCGGGTGTCCAACTCGTTCC
GGATCCCACGATCCCGACCGAGGAGACGGGCACTCGCCACCGCACCGCGGACCGGGTCAGCAAGCAGGTCGGATTCCCTG
TGGTCTCGGTCTCCCAGTCCATGCGGCTGATCGCGCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGTTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCCGTCGCCCAGCGACTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACCGATGGGCGTCTCCTCGCTCTCCAGCTGGACGAGTTGATCGCC
GGCGTCGAACCCGAGCGTGAACTGGTCGTCCGGGACTACGTTCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGAGGA
GGCGCTGGCCGAACTGGACGCCCTCACCCACGCCGAGCTGCTCGAACTGCCCACGGTGGCCCGAGCGTTGGGCTACACGG
GCTCCCCCGAGGCCCTCGACTCCGCGGTGTCCCCGCGCGGCTTCCGCCTCCTCGCCAAGGTGCCGCGCCTCCCGGGCGCC
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGCCTGCAGAAACTCCTCGCCGCCAGCGTGGACGACCTCCAGACGGTCGA
GGGCGTGGGCGAGGCGCGTGCGCGCAGCGTCCGAGAGGGCCTGTCCCGCCTGGCGGAGTCGTCGATCCTGGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

47.11

92.513

0.436


Multiple sequence alignment