Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKY51_RS16670 Genome accession   NZ_CP150231
Coordinates   3309518..3310474 (-) Length   318 a.a.
NCBI ID   WP_339174137.1    Uniprot ID   -
Organism   Solibacillus sp. FSL R5-0691     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3304518..3315474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY51_RS16645 (MKY51_16645) - 3305471..3306064 (-) 594 WP_339174124.1 phosphatase PAP2 family protein -
  MKY51_RS16650 (MKY51_16650) - 3306193..3306525 (-) 333 WP_339174126.1 antibiotic biosynthesis monooxygenase -
  MKY51_RS16655 (MKY51_16655) - 3306590..3307627 (-) 1038 WP_339174129.1 siderophore ABC transporter substrate-binding protein -
  MKY51_RS16660 (MKY51_16660) - 3307811..3308578 (-) 768 WP_079523338.1 ABC transporter ATP-binding protein -
  MKY51_RS16665 (MKY51_16665) - 3308575..3309531 (-) 957 WP_339174134.1 iron chelate uptake ABC transporter family permease subunit -
  MKY51_RS16670 (MKY51_16670) ceuB 3309518..3310474 (-) 957 WP_339174137.1 ABC transporter permease Machinery gene
  MKY51_RS16675 (MKY51_16675) menC 3311134..3312243 (-) 1110 WP_339174140.1 o-succinylbenzoate synthase -
  MKY51_RS16680 (MKY51_16680) - 3312291..3313124 (-) 834 WP_339174143.1 GNAT family N-acetyltransferase -
  MKY51_RS16685 (MKY51_16685) - 3313530..3315014 (-) 1485 WP_339174145.1 peptide MFS transporter -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34854.11 Da        Isoelectric Point: 9.5449

>NTDB_id=967106 MKY51_RS16670 WP_339174137.1 3309518..3310474(-) (ceuB) [Solibacillus sp. FSL R5-0691]
MRLWMLVAATIVLSFLSLFIGAIDIKPSDLLDWESDKMQIFLMSRVPRLMAIILAGAGMGISGLIMQSLSRNKFVSPTTS
GTLDAAKLGIVVSMIFFTSVGYMEKIIFSFAFALIGMMVFMRLLESIKFKDVIFVPLIGIMYGNIIGAISTFLAYEADVL
QSVDTFFLGSFTLVVSGRYELLYIAVPAIFLAYLYANKFTVAGMGEDFAKNLGLSYRTVLNLGLVLVAVISTTVVLTVGI
IPFLGLIVPNLVSLYMGDNLRKTIPHTIFLGAAFLLMCDILSRLIVYPFEIPVNTTVAVIGSAIFLVMLFRGKAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=967106 MKY51_RS16670 WP_339174137.1 3309518..3310474(-) (ceuB) [Solibacillus sp. FSL R5-0691]
ATGAGACTTTGGATGCTCGTAGCAGCGACCATCGTTCTGTCCTTTTTATCATTATTTATTGGTGCAATCGATATTAAGCC
ATCTGATTTATTAGACTGGGAATCAGATAAAATGCAAATTTTCTTAATGAGTCGAGTACCACGATTGATGGCAATTATAC
TTGCCGGGGCAGGGATGGGTATTTCTGGATTAATTATGCAAAGCTTAAGCCGTAACAAGTTCGTATCGCCGACAACTTCG
GGTACGCTCGATGCGGCAAAGTTAGGTATCGTTGTATCAATGATATTTTTCACAAGTGTAGGATATATGGAGAAAATTAT
TTTCAGCTTTGCCTTTGCACTGATCGGTATGATGGTTTTCATGCGTCTTCTTGAAAGCATTAAATTCAAAGACGTTATTT
TTGTACCCCTTATCGGGATTATGTACGGAAATATTATTGGTGCCATTTCAACATTTCTTGCGTATGAGGCAGATGTGTTA
CAAAGTGTGGATACATTCTTCCTAGGAAGTTTTACGCTTGTTGTCTCAGGTCGCTATGAATTACTTTATATAGCAGTACC
TGCAATTTTCCTTGCGTACTTATATGCGAATAAGTTTACAGTGGCAGGTATGGGTGAAGATTTCGCCAAAAACCTTGGCT
TAAGCTATCGTACCGTATTAAATCTTGGTTTAGTACTGGTAGCGGTTATATCCACTACAGTTGTTTTGACGGTAGGGATT
ATTCCTTTCCTTGGATTAATCGTACCGAACTTGGTTTCATTATATATGGGCGACAATTTACGTAAAACGATCCCACATAC
GATATTCTTAGGTGCAGCATTCCTATTAATGTGTGATATTTTAAGTCGTTTAATAGTATACCCGTTTGAAATTCCAGTAA
ACACAACGGTAGCGGTAATCGGCAGTGCAATCTTCTTAGTAATGTTGTTTAGGGGGAAAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.949

99.371

0.506

Multiple sequence alignment