Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MKY51_RS10345 Genome accession   NZ_CP150231
Coordinates   2059615..2061306 (-) Length   563 a.a.
NCBI ID   WP_339171715.1    Uniprot ID   -
Organism   Solibacillus sp. FSL R5-0691     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2054615..2066306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY51_RS10325 (MKY51_10325) - 2055988..2056422 (-) 435 WP_339171705.1 hypothetical protein -
  MKY51_RS10330 (MKY51_10330) - 2056776..2057249 (+) 474 WP_339171707.1 DNA polymerase III subunit alpha -
  MKY51_RS10335 (MKY51_10335) spo0A 2057358..2058149 (-) 792 WP_339171709.1 sporulation transcription factor Spo0A -
  MKY51_RS10340 (MKY51_10340) - 2058500..2059423 (-) 924 WP_339171713.1 SpoIVB peptidase S55 domain-containing protein -
  MKY51_RS10345 (MKY51_10345) recN 2059615..2061306 (-) 1692 WP_339171715.1 DNA repair protein RecN Machinery gene
  MKY51_RS10350 (MKY51_10350) argR 2061323..2061772 (-) 450 WP_079527588.1 transcriptional regulator ArgR -
  MKY51_RS10355 (MKY51_10355) - 2062044..2062862 (-) 819 WP_339171719.1 TlyA family RNA methyltransferase -
  MKY51_RS10360 (MKY51_10360) dxs 2062869..2064764 (-) 1896 WP_339171721.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MKY51_RS10365 (MKY51_10365) - 2064854..2065738 (-) 885 WP_339171724.1 polyprenyl synthetase family protein -
  MKY51_RS10370 (MKY51_10370) xseB 2065742..2065969 (-) 228 WP_008404237.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 563 a.a.        Molecular weight: 63637.09 Da        Isoelectric Point: 4.7245

>NTDB_id=967093 MKY51_RS10345 WP_339171715.1 2059615..2061306(-) (recN) [Solibacillus sp. FSL R5-0691]
MLRELSIRNFAIIDDLTVSFFGGLTVLTGETGAGKSIIIDAVNILAGGRGSTEFIRHGEKKAELGGLFHVDNSQHPIFAK
LEEHGIESEEDTIILRRDLHDSGKSVCRVNGKLVPLSVLRDIGGSLIDIHGQHENQELMDEKFHINLLDHYAHHELQPVK
AKYDEAYEAYRQLKREVAELSMDEQRMAQRIDLYQFQIQELEQAGLKIDEEEALDEERLRLMNFHKIFERANIAYSAISD
DGTGLDFIGNAMNALEDIVALDSNFKEASEAVTSSFYALQDAAYQVKNVLDDLEYDAERLNEVEQRLALYQTMKRKYGTT
VEEILSYHEKIEEELSQLMNRDETLQKNEQLLAKMEADLNKIADQLTTIRKENAIKLSDAIMNELRMLHMEKAQFIVKFE
PLNQLDANGKDFVAFYISTNVGEPPKSLPKVASGGELSRMMLALKTIFSSSNGITSIIFDEVDTGVSGRVAQAIAEKIAA
ISVNSQVLCISHLPQVAAMADHHYYIKKQVEHNRTFTSITEMEEKERIVEISRMMSGAEITDLTLQHASELIHMANERKE
TMN

Nucleotide


Download         Length: 1692 bp        

>NTDB_id=967093 MKY51_RS10345 WP_339171715.1 2059615..2061306(-) (recN) [Solibacillus sp. FSL R5-0691]
TTGTTAAGAGAATTAAGCATTCGAAATTTTGCTATTATTGATGATTTAACCGTTAGTTTTTTCGGAGGTCTGACTGTTTT
GACAGGTGAAACAGGTGCCGGAAAATCGATCATTATTGATGCGGTTAATATATTGGCTGGCGGACGAGGGTCTACCGAAT
TTATCCGCCATGGAGAAAAAAAAGCGGAACTGGGCGGCTTATTCCATGTGGATAATAGTCAGCATCCGATTTTTGCGAAA
CTCGAAGAACATGGGATAGAATCAGAGGAAGATACGATTATTTTAAGACGTGATTTGCATGATTCAGGAAAGAGTGTTTG
CAGAGTGAACGGCAAACTTGTTCCATTATCGGTTTTACGGGATATTGGCGGCAGTTTAATCGATATTCATGGGCAGCATG
AAAATCAGGAGCTGATGGATGAAAAATTCCATATCAATTTACTGGATCATTATGCACATCATGAGCTTCAGCCGGTGAAA
GCGAAGTACGATGAAGCGTATGAAGCGTACCGCCAATTGAAAAGAGAAGTGGCCGAGCTGAGTATGGACGAGCAGCGGAT
GGCACAGCGCATCGATTTATATCAATTCCAAATACAGGAGCTGGAACAGGCCGGTTTGAAAATTGATGAAGAAGAGGCAC
TGGATGAAGAACGTCTTCGTTTGATGAATTTCCATAAAATATTTGAGCGTGCGAACATTGCGTATTCAGCCATTTCCGAT
GATGGAACAGGACTGGATTTCATCGGGAATGCGATGAATGCTCTGGAAGACATTGTCGCGCTTGATTCGAATTTCAAAGA
GGCTTCTGAAGCGGTTACTTCGAGCTTTTATGCATTGCAGGATGCGGCATATCAAGTGAAAAATGTGCTTGATGATTTAG
AATATGATGCGGAACGCTTGAACGAGGTCGAGCAGCGTCTTGCTTTATACCAAACTATGAAACGTAAATATGGTACGACA
GTTGAAGAGATTTTATCGTATCATGAAAAAATCGAAGAAGAGTTAAGCCAGCTTATGAACCGTGATGAAACATTGCAGAA
AAATGAACAATTGCTGGCGAAGATGGAAGCCGATCTTAATAAAATTGCAGATCAGTTGACGACGATCCGTAAAGAGAATG
CCATTAAGCTAAGTGATGCCATAATGAATGAGCTGCGGATGCTGCATATGGAAAAAGCGCAGTTTATCGTTAAATTCGAG
CCGCTTAATCAACTGGATGCAAACGGCAAGGATTTTGTCGCATTCTACATTTCAACAAATGTTGGGGAACCACCGAAGTC
GCTGCCTAAAGTTGCTTCAGGCGGGGAACTTTCACGGATGATGCTTGCGCTTAAAACGATTTTCTCGTCATCAAATGGCA
TTACATCGATTATTTTCGATGAGGTCGATACGGGTGTGAGCGGACGTGTCGCTCAGGCAATTGCAGAAAAAATTGCCGCT
ATTTCAGTCAATTCGCAAGTATTATGTATTTCTCACTTGCCGCAAGTTGCCGCAATGGCGGATCATCACTACTATATTAA
AAAGCAAGTAGAGCATAACCGCACATTTACGTCGATTACGGAAATGGAAGAAAAAGAACGCATTGTGGAAATCAGCCGCA
TGATGAGCGGGGCCGAAATTACAGACCTGACATTACAACATGCTTCCGAATTAATCCATATGGCCAATGAACGTAAAGAA
ACGATGAATTAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

53.299

100

0.545

Multiple sequence alignment