Detailed information NTG0967069

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACKZ9A_RS24120
• Genome accession: NZ_CP176484
• Coordinates: 4563885..4564910 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain N921
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4558885..4569910

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKZ9A_RS24100 (ACKZ9A_24090)	metJ	4559946..4560263 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACKZ9A_RS24105 (ACKZ9A_24095)	yiiX	4560447..4561055 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACKZ9A_RS24110 (ACKZ9A_24100)	rpmE	4561116..4561328 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACKZ9A_RS24115 (ACKZ9A_24105)	priA	4561531..4563729 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACKZ9A_RS24120 (ACKZ9A_24110)	cytR	4563885..4564910 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACKZ9A_RS24125 (ACKZ9A_24115)	ftsN	4565002..4565961 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACKZ9A_RS24130 (ACKZ9A_24120)	hslV	4566054..4566584 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACKZ9A_RS24135 (ACKZ9A_24125)	hslU	4566594..4567925 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACKZ9A_RS24140 (ACKZ9A_24130)	menA	4567992..4568918 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACKZ9A_RS24145 (ACKZ9A_24135)	rraA	4569011..4569496 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACKZ9A_RS24150 (ACKZ9A_24140)	zapB	4569581..4569826 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=967069 ACKZ9A_RS24120 WP_000644904.1 4563885..4564910(+) (cytR) [Escherichia coli strain N921]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=967069 ACKZ9A_RS24120 WP_000644904.1 4563885..4564910(+) (cytR) [Escherichia coli strain N921]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628