Detailed information NTG0096703

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AABJ90_RS19095
• Genome accession: NZ_AP028964
• Coordinates: 3743014..3744135 (-)
• Length: 373 a.a.
• NCBI ID: WP_033883134.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain NA05 = NBRC 116153
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3738014..3749135

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ90_RS19075 (BsubNA05_36850)	znuC	3738524..3739219 (-)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-
AABJ90_RS19080 (BsubNA05_36860)	znuA	3739274..3740233 (-)	960	WP_338382246.1	metal ABC transporter substrate-binding protein	-
AABJ90_RS19085 (BsubNA05_36870)	ycdG	3740421..3742106 (-)	1686	WP_338382247.1	alpha-glucosidase	-
AABJ90_RS19090 (BsubNA05_36880)	ycdF	3742131..3742907 (-)	777	WP_033883133.1	SDR family oxidoreductase	-
AABJ90_RS19095 (BsubNA05_36890)	rapF	3743014..3744135 (-)	1122	WP_033883134.1	response regulator aspartate phosphatase RapJ	Regulator
AABJ90_RS19100 (BsubNA05_36900)	cwlK	3744258..3744761 (+)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
AABJ90_RS19105 (BsubNA05_36910)	ycdC	3744769..3746130 (-)	1362	WP_338382695.1	YcdB/YcdC domain-containing protein	-
AABJ90_RS19110 (BsubNA05_36920)	ycdB	3746317..3747738 (-)	1422	WP_338382250.1	YcdB/YcdC domain-containing protein	-
AABJ90_RS19115	-	3747913..3748044 (+)	132	WP_003246334.1	hypothetical protein	-
AABJ90_RS19120 (BsubNA05_36930)	ycdA	3748067..3749131 (+)	1065	WP_003234750.1	DUF4352 domain-containing protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44407.28 Da
• Isoelectric Point: 4.7838

>NTDB_id=96703 AABJ90_RS19095 WP_033883134.1 3743014..3744135(-) (rapF) [Bacillus subtilis strain NA05 = NBRC 116153]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAEHFNQLEYYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=96703 AABJ90_RS19095 WP_033883134.1 3743014..3744135(-) (rapF) [Bacillus subtilis strain NA05 = NBRC 116153]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGTGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATTTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACATTTCAATCAGCT
GGAATATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405