Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   ACJPHY_RS07290 Genome accession   NZ_CP176424
Coordinates   1555126..1555482 (+) Length   118 a.a.
NCBI ID   WP_003091119.1    Uniprot ID   A0A0H2ZD30
Organism   Pseudomonas aeruginosa strain IGLPR01     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1550126..1560482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJPHY_RS07265 fabF 1550338..1551582 (+) 1245 WP_043511655.1 beta-ketoacyl-ACP synthase II -
  ACJPHY_RS07270 pabC 1551582..1552397 (+) 816 WP_034082729.1 aminodeoxychorismate lyase -
  ACJPHY_RS07275 mltG 1552403..1553452 (+) 1050 WP_033955214.1 endolytic transglycosylase MltG -
  ACJPHY_RS07280 tmk 1553481..1554113 (+) 633 WP_034024849.1 dTMP kinase -
  ACJPHY_RS07285 - 1554106..1555092 (+) 987 WP_023875119.1 DNA polymerase III subunit delta' -
  ACJPHY_RS07290 pilZ 1555126..1555482 (+) 357 WP_003091119.1 PilZ domain-containing protein Machinery gene
  ACJPHY_RS07295 - 1555497..1556273 (+) 777 WP_003091117.1 TatD family hydrolase -
  ACJPHY_RS07300 - 1556499..1557632 (-) 1134 WP_074222393.1 aminotransferase class V-fold PLP-dependent enzyme -
  ACJPHY_RS07305 - 1557718..1558356 (+) 639 WP_003091114.1 TetR/AcrR family transcriptional regulator -
  ACJPHY_RS07310 - 1558523..1559419 (+) 897 WP_003091113.1 radical SAM protein -
  ACJPHY_RS07315 - 1559484..1560116 (+) 633 WP_003091112.1 DUF4823 domain-containing protein -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 12903.98 Da        Isoelectric Point: 9.9969

>NTDB_id=966916 ACJPHY_RS07290 WP_003091119.1 1555126..1555482(+) (pilZ) [Pseudomonas aeruginosa strain IGLPR01]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM

Nucleotide


Download         Length: 357 bp        

>NTDB_id=966916 ACJPHY_RS07290 WP_003091119.1 1555126..1555482(+) (pilZ) [Pseudomonas aeruginosa strain IGLPR01]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAGGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA

Domains

Predicted by InterProScan.

PilZ domain (PilZ)

(17-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZD30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

49.074

91.525

0.449
  pilZ Legionella pneumophila strain ERS1305867

49.074

91.525

0.449