Detailed information NTG0096687

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AABJ90_RS17035
• Genome accession: NZ_AP028964
• Coordinates: 3327588..3328715 (+)
• Length: 375 a.a.
• NCBI ID: WP_338382118.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain NA05 = NBRC 116153
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3322588..3333715

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ90_RS17010 (BsubNA05_32940)	-	3323277..3324197 (-)	921	WP_338382116.1	DUF5655 domain-containing protein	-
AABJ90_RS17015 (BsubNA05_32950)	-	3324210..3324548 (-)	339	WP_029726615.1	hypothetical protein	-
AABJ90_RS17020 (BsubNA05_32960)	-	3324715..3326601 (+)	1887	WP_338382117.1	T7SS effector LXG polymorphic toxin	-
AABJ90_RS17025 (BsubNA05_32970)	-	3326614..3327009 (+)	396	WP_326131854.1	immunity 22 family protein	-
AABJ90_RS17030 (BsubNA05_32980)	-	3327094..3327398 (+)	305	Protein_3347	hypothetical protein	-
AABJ90_RS17035 (BsubNA05_32990)	rapC	3327588..3328715 (+)	1128	WP_338382118.1	Rap family tetratricopeptide repeat protein	Regulator
AABJ90_RS17040 (BsubNA05_33000)	-	3328705..3328896 (+)	192	WP_319621518.1	hypothetical protein	-
AABJ90_RS17045 (BsubNA05_33010)	rlmD	3329130..3330515 (-)	1386	WP_338382119.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	-
AABJ90_RS17050 (BsubNA05_33020)	dagK	3330772..3331683 (-)	912	WP_003233894.1	diacylglycerol kinase	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44417.31 Da
• Isoelectric Point: 7.7511

>NTDB_id=96687 AABJ90_RS17035 WP_338382118.1 3327588..3328715(+) (rapC) [Bacillus subtilis strain NA05 = NBRC 116153]
MGKISSPHVGMKINEWNRHIQKFNVTDAEMLKAEIERDIDIMEEDQDLLIYYQLIAFRHQLMIDYVIPSEGKQMKLSEYL
KRIEGNNRKMEKLVEYYYYFFQGMYEFKQGNFLTAITLYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEQSILQFKKSNFNNLTQAYHDLALIYFLQHKQDQAMDCFRKGVRFACKFDNGLFKIMFEGLQALFIKKGETSILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=96687 AABJ90_RS17035 WP_338382118.1 3327588..3328715(+) (rapC) [Bacillus subtilis strain NA05 = NBRC 116153]
TTGGGCAAGATTTCGTCTCCGCACGTTGGGATGAAAATTAATGAGTGGAACCGGCATATTCAAAAGTTTAATGTGACAGA
TGCTGAAATGCTTAAAGCTGAGATCGAACGGGACATTGACATTATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCATCTGAAGGAAAACAAATGAAGTTGTCAGAATATTTA
AAGAGAATTGAAGGCAACAACAGGAAGATGGAGAAACTAGTTGAATATTACTATTACTTTTTTCAGGGAATGTATGAATT
TAAACAAGGCAATTTCTTGACTGCTATTACACTCTATCAAAAAGCAGAAAACACAATTCCCTATATTTCAGATGAAATTG
AGCGGGCGGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACGCACGATCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTGATCGCAGGTAACTA
CGACGATTTAGAAAGTCATGAAAAGGCACTCCCTCACCTCGAGCAGGCACTAAAAGGCGCACGGCTGCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATGGGCGAATTGACGAAAGCAGCAAAA
TACATGGAGCAATCGATACTCCAATTCAAAAAATCAAATTTCAACAACTTGACACAAGCTTATCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGACCAGGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGACAATG
GCCTATTTAAAATCATGTTCGAAGGATTGCAGGCGCTGTTTATCAAAAAAGGAGAAACGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGTTATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (221-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.425	100	0.419
rapF	Bacillus subtilis subsp. subtilis str. 168	38.522	100	0.389