Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ACKWPP_RS07580 Genome accession   NZ_CP176418
Coordinates   1482127..1482609 (+) Length   160 a.a.
NCBI ID   WP_024381385.1    Uniprot ID   -
Organism   Streptococcus suis strain KKAHC02     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1477127..1487609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKWPP_RS07545 (ACKWPP_07545) - 1477415..1478056 (+) 642 WP_409373756.1 hypothetical protein -
  ACKWPP_RS07550 (ACKWPP_07550) - 1478067..1478234 (+) 168 WP_172028026.1 hypothetical protein -
  ACKWPP_RS07555 (ACKWPP_07555) - 1478384..1479694 (-) 1311 WP_044683219.1 GntP family permease -
  ACKWPP_RS07560 (ACKWPP_07560) folK 1479745..1480233 (-) 489 WP_409373757.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  ACKWPP_RS07565 (ACKWPP_07565) folB 1480230..1480592 (-) 363 WP_012027113.1 dihydroneopterin aldolase -
  ACKWPP_RS07570 (ACKWPP_07570) folP 1480585..1481397 (-) 813 WP_409373758.1 dihydropteroate synthase -
  ACKWPP_RS07575 (ACKWPP_07575) folE 1481406..1481969 (-) 564 WP_409373759.1 GTP cyclohydrolase I FolE -
  ACKWPP_RS07580 (ACKWPP_07580) mutX 1482127..1482609 (+) 483 WP_024381385.1 8-oxo-dGTP diphosphatase Machinery gene
  ACKWPP_RS07585 (ACKWPP_07585) - 1482658..1483335 (-) 678 WP_409373760.1 DUF4956 domain-containing protein -
  ACKWPP_RS07590 (ACKWPP_07590) - 1483322..1484065 (-) 744 WP_409373761.1 polyphosphate polymerase domain-containing protein -
  ACKWPP_RS07595 (ACKWPP_07595) - 1484258..1484560 (+) 303 WP_014637822.1 hypothetical protein -
  ACKWPP_RS07600 (ACKWPP_07600) - 1484581..1484847 (-) 267 WP_014637821.1 DUF2087 domain-containing protein -
  ACKWPP_RS07605 (ACKWPP_07605) pheT 1484902..1487301 (-) 2400 WP_409373762.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18540.89 Da        Isoelectric Point: 4.4960

>NTDB_id=966858 ACKWPP_RS07580 WP_024381385.1 1482127..1482609(+) (mutX) [Streptococcus suis strain KKAHC02]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=966858 ACKWPP_RS07580 WP_024381385.1 1482127..1482609(+) (mutX) [Streptococcus suis strain KKAHC02]
ATGACCAAGAAACCCGTCCAACTCGCTACCATTTGCTACATTGATAATGGCAAGGAATTTCTCCTGCTCCATCGCAATAA
AAAAGAAAACGATGTCCATCAAGGGAAATGGATTGGAGTTGGTGGCAAACTGGAACCTGGCGAAACACCACAGGCTTGCG
CTATTCGTGAAGTCTTTGAGGAAACTGGGCTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGATAAACTGCTTGATTACAGTGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

95.625

0.775