Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   ACKWPP_RS03140 Genome accession   NZ_CP176418
Coordinates   565013..565747 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis strain KKAHC02     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 560013..570747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKWPP_RS03115 (ACKWPP_03115) - 560512..560820 (-) 309 WP_002938710.1 DUF1827 family protein -
  ACKWPP_RS03120 (ACKWPP_03120) - 560875..561336 (-) 462 WP_002938708.1 NUDIX hydrolase -
  ACKWPP_RS03125 (ACKWPP_03125) clpE 561523..563751 (-) 2229 WP_409374164.1 AAA family ATPase Regulator
  ACKWPP_RS03130 (ACKWPP_03130) - 563975..564205 (+) 231 WP_002938704.1 DUF1797 family protein -
  ACKWPP_RS03135 (ACKWPP_03135) - 564331..565020 (+) 690 WP_002938702.1 amino acid ABC transporter permease -
  ACKWPP_RS03140 (ACKWPP_03140) amiE 565013..565747 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  ACKWPP_RS03145 (ACKWPP_03145) - 565877..566725 (+) 849 WP_409374165.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  ACKWPP_RS03150 (ACKWPP_03150) - 567296..569473 (+) 2178 WP_409374166.1 YSIRK-type signal peptide-containing protein -
  ACKWPP_RS03155 (ACKWPP_03155) - 569635..569994 (+) 360 WP_409374167.1 hypothetical protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=966833 ACKWPP_RS03140 WP_002943067.1 565013..565747(+) (amiE) [Streptococcus suis strain KKAHC02]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=966833 ACKWPP_RS03140 WP_002943067.1 565013..565747(+) (amiE) [Streptococcus suis strain KKAHC02]
ATGTCTAATGCGATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTGGTCGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTGCCAACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCGAATATGACGGTATTAGATAACATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CGAATGCCTATCCACAAAGCCTTTCAGGTGGTCAGCAACAGCGGATCGCTATTGCACGTGGTCTGGCTATGGACCCAGAT
GTCCTACTTTTTGATGAACCGACCTCTGCACTAGACCCTGAAATGGTTGGTGAAGTTCTTGCTGTAATGCAGGATTTGGC
CAAGTCGGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGCGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACCAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365