Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKZ15_RS21985 Genome accession   NZ_CP150222
Coordinates   4779705..4780658 (-) Length   317 a.a.
NCBI ID   WP_339818171.1    Uniprot ID   -
Organism   Paenibacillus sp. FSL R7-0216     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4774705..4785658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKZ15_RS21965 (MKZ15_21965) - 4775979..4776803 (+) 825 WP_339818163.1 aldo/keto reductase -
  MKZ15_RS21970 (MKZ15_21970) - 4776964..4777959 (-) 996 WP_339822551.1 siderophore ABC transporter substrate-binding protein -
  MKZ15_RS21975 (MKZ15_21975) - 4778007..4778771 (-) 765 WP_213622271.1 ABC transporter ATP-binding protein -
  MKZ15_RS21980 (MKZ15_21980) - 4778765..4779715 (-) 951 WP_339818168.1 iron chelate uptake ABC transporter family permease subunit -
  MKZ15_RS21985 (MKZ15_21985) ceuB 4779705..4780658 (-) 954 WP_339818171.1 ABC transporter permease Machinery gene
  MKZ15_RS21990 (MKZ15_21990) - 4780906..4781913 (-) 1008 WP_339818174.1 Gfo/Idh/MocA family oxidoreductase -
  MKZ15_RS21995 (MKZ15_21995) - 4781992..4782201 (+) 210 WP_240908599.1 DUF4023 family protein -
  MKZ15_RS22000 (MKZ15_22000) - 4782260..4782445 (-) 186 WP_155604864.1 hypothetical protein -
  MKZ15_RS22005 (MKZ15_22005) - 4782656..4783165 (+) 510 WP_193417036.1 hypothetical protein -
  MKZ15_RS22010 (MKZ15_22010) - 4783234..4784316 (-) 1083 WP_339818179.1 Gfo/Idh/MocA family oxidoreductase -
  MKZ15_RS22015 (MKZ15_22015) menA 4784399..4785346 (-) 948 WP_155604862.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34732.64 Da        Isoelectric Point: 9.5906

>NTDB_id=966832 MKZ15_RS21985 WP_339818171.1 4779705..4780658(-) (ceuB) [Paenibacillus sp. FSL R7-0216]
MKKTYMAVLLVALSLVSLFIGVGELSLAALLRFDPEQWELLRISRIPRLISILIAGVSMSIVGLIMQQLTRNKFVSPTTA
GTMDSASFGIMVSLLVFTTAGPLVKMSVAFGFALLGTYLFMAILNRVKYKDAIFIPLVGLMFGGIVESATTFFAYKYNLI
QSMSAWLYGDFSMIMQGRYELLYISVPLVVLSYVYANKFTVAGMGEEFSVNLGLNYRQVVNIGLGLVALVTAVVVLTVGS
IPFLGLIIPNLVTMFRGDNLKDNLTHTALLGAVFVLACDILGRVIIYPYEISIGLTVGVIGSGIFLYLLMRRRTYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=966832 MKZ15_RS21985 WP_339818171.1 4779705..4780658(-) (ceuB) [Paenibacillus sp. FSL R7-0216]
ATGAAGAAAACTTATATGGCAGTGCTGCTGGTTGCTCTATCCCTTGTCTCTTTGTTTATCGGAGTCGGGGAGCTGTCCCT
AGCCGCCCTGCTGCGTTTCGATCCGGAACAATGGGAACTCTTGCGCATCAGCCGGATTCCCCGGTTAATCAGTATTCTCA
TCGCCGGAGTCAGCATGAGCATCGTCGGTTTGATTATGCAGCAGCTGACCCGCAACAAATTCGTATCCCCGACGACGGCG
GGAACGATGGACTCGGCGAGCTTTGGCATTATGGTATCGCTGCTTGTCTTTACGACCGCAGGGCCGCTCGTCAAGATGTC
CGTCGCCTTTGGGTTTGCTTTGCTGGGTACGTATCTTTTTATGGCGATTCTCAATCGGGTGAAATACAAGGATGCCATCT
TCATCCCGCTGGTCGGGCTGATGTTCGGCGGCATCGTGGAATCGGCAACGACCTTTTTCGCTTACAAATACAATTTGATT
CAGAGCATGTCCGCTTGGCTGTACGGAGATTTCTCCATGATCATGCAGGGCCGATACGAGCTGCTGTATATCAGTGTCCC
GCTTGTGGTGCTCTCCTACGTTTACGCCAATAAATTTACGGTGGCAGGCATGGGTGAGGAGTTTTCCGTCAATCTCGGAT
TGAACTACAGACAGGTCGTCAATATCGGATTGGGCCTGGTGGCGCTCGTGACGGCTGTTGTCGTGCTGACGGTGGGGTCG
ATTCCTTTTCTTGGACTCATCATTCCAAACCTGGTCACGATGTTCCGCGGAGACAACCTGAAAGATAATTTGACCCATAC
AGCTTTGCTGGGCGCAGTCTTCGTGCTGGCCTGCGACATCTTGGGTCGAGTCATCATCTATCCGTACGAAATCTCGATCG
GCCTGACCGTCGGGGTGATCGGAAGCGGGATCTTCCTGTATCTGCTGATGAGGAGAAGGACCTATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.273

97.161

0.508

Multiple sequence alignment