Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACKWPP_RS02895 Genome accession   NZ_CP176418
Coordinates   516936..517712 (+) Length   258 a.a.
NCBI ID   WP_409374159.1    Uniprot ID   -
Organism   Streptococcus suis strain KKAHC02     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 511936..522712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKWPP_RS02890 (ACKWPP_02890) rlmD 515546..516898 (-) 1353 WP_409374158.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  ACKWPP_RS02895 (ACKWPP_02895) recX 516936..517712 (+) 777 WP_409374159.1 recombination regulator RecX Regulator
  ACKWPP_RS02900 (ACKWPP_02900) - 517979..519142 (-) 1164 WP_409373697.1 IS30 family transposase -
  ACKWPP_RS02905 (ACKWPP_02905) - 519339..519872 (+) 534 WP_004194106.1 DUF402 domain-containing protein -
  ACKWPP_RS02910 (ACKWPP_02910) - 519930..520247 (+) 318 WP_004194104.1 DUF960 domain-containing protein -
  ACKWPP_RS02915 (ACKWPP_02915) - 520347..521078 (+) 732 WP_004194101.1 GntR family transcriptional regulator -
  ACKWPP_RS02920 (ACKWPP_02920) - 521227..521937 (-) 711 WP_015646515.1 GntR family transcriptional regulator -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30472.98 Da        Isoelectric Point: 9.3979

>NTDB_id=966831 ACKWPP_RS02895 WP_409374159.1 516936..517712(+) (recX) [Streptococcus suis strain KKAHC02]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDGNYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKPLIDKRLAEEDFSELAGKIGEK
LVGRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDDLIAKELDKQYRKYSRKYEGYELKQRLIQAL
ARKGYDFDRIQTVLRDYR

Nucleotide


Download         Length: 777 bp        

>NTDB_id=966831 ACKWPP_RS02895 WP_409374159.1 516936..517712(+) (recX) [Streptococcus suis strain KKAHC02]
ATGAGAATTACAAAAATTGAAAAGAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGAAATCACGGAGCAGGAGTTTCGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCAAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTCAAGATTGTGACGGTATTAGAAGAGGAAAAATGGCTGGACGATGGGAA
TTATGTTGATAGCTATGTTCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGTCAGAAGTTGATGCAGA
AAGGAATTCCTAAACCGCTGATTGATAAAAGGCTGGCTGAGGAAGATTTTTCAGAGCTTGCTGGGAAGATTGGGGAGAAA
TTGGTGGGTAGATACCAAAGAAAGTTGCCTCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGCAAGGGTTT
TTCTTATGAGACGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGATTTAATCGCCA
AGGAATTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTATGAATTGAAGCAAAGGTTGATACAGGCTTTA
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGACTGTCCTTCGTGATTATCGGTAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.206

100

0.364