Detailed information NTG0966752

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ACKUBV_RS10185
• Genome accession: NZ_CP176357
• Coordinates: 2164146..2166350 (+)
• Length: 734 a.a.
• NCBI ID: WP_140201821.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain AG1
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2159146..2171350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKUBV_RS10145 (ACKUBV_10145)	rplV	2159815..2160147 (-)	333	WP_005383164.1	50S ribosomal protein L22	-
ACKUBV_RS10150 (ACKUBV_10150)	rpsS	2160158..2160436 (-)	279	WP_004394525.1	30S ribosomal protein S19	-
ACKUBV_RS10155 (ACKUBV_10155)	rplB	2160458..2161282 (-)	825	WP_005489461.1	50S ribosomal protein L2	-
ACKUBV_RS10160 (ACKUBV_10160)	rplW	2161298..2161600 (-)	303	WP_004398471.1	50S ribosomal protein L23	-
ACKUBV_RS10165 (ACKUBV_10165)	rplD	2161597..2162199 (-)	603	WP_005379556.1	50S ribosomal protein L4	-
ACKUBV_RS10170 (ACKUBV_10170)	rplC	2162217..2162846 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
ACKUBV_RS10175 (ACKUBV_10175)	rpsJ	2162861..2163172 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
ACKUBV_RS10180 (ACKUBV_10180)	rpmE	2163630..2163851 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
ACKUBV_RS10185 (ACKUBV_10185)	priA	2164146..2166350 (+)	2205	WP_140201821.1	primosomal protein N'	Machinery gene
ACKUBV_RS10190 (ACKUBV_10190)	cytR	2166644..2167690 (+)	1047	WP_254894148.1	DNA-binding transcriptional regulator CytR	Regulator
ACKUBV_RS10195 (ACKUBV_10195)	ftsN	2167867..2168412 (+)	546	WP_005481405.1	cell division protein FtsN	-
ACKUBV_RS10200 (ACKUBV_10200)	hslV	2168577..2169128 (+)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
ACKUBV_RS10205 (ACKUBV_10205)	hslU	2169152..2170483 (+)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
ACKUBV_RS10210 (ACKUBV_10210)	-	2170898..2171122 (-)	225	WP_024703419.1	hypothetical protein	-

Sequence

Protein

• Length: 734 a.a.
• Molecular weight: 82255.83 Da
• Isoelectric Point: 8.5714

>NTDB_id=966752 ACKUBV_RS10185 WP_140201821.1 2164146..2166350(+) (priA) [Vibrio parahaemolyticus strain AG1]
MRPSIARVALPVPLDKQFDYAIPGHLFPIIGGRVSVPFGRQTLVGIVTAMVNHSDFPKDQLKPIKAVLDSQPVWPEKLYS
LLIWCSQFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQITESGKDKLMQGLDRRAIKQQKVLQMLVNGALPHQEFVDQ
EIASTVLKSLEDKGWIERIEKKPAITQWGQHVECDVEKPKLNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIK
PVLEKGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNETERLNAWLSARDKAAGIIIGTRSALLAPFADLGIIIV
DEEHDTSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATPALETLHNALSGKYHHLTLTQRAGSAVPTSNKVLDVKGQYL
ESGLSAPLIAEMRKHLKAGNQVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVIHQCQGC
GSTQLVTVGVGTEQLEQQLAQLFPEYKAIRIDRDSTRRKGSLEDALESIRKGEYQILIGTQMLAKGHHFPNVTLVALLDV
DGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHPEHSLLQALLEKDYRHFAMTALEERKLAQLPPYSFLTLF
KAEANQSEIVEDFLRQVRFTLESHPLFDDTCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLTSAKPAIELLPNAK
KVRWNLDIEPQDLS

Nucleotide

• Length: 2205 bp

>NTDB_id=966752 ACKUBV_RS10185 WP_140201821.1 2164146..2166350(+) (priA) [Vibrio parahaemolyticus strain AG1]
ATGCGTCCATCCATTGCTAGAGTGGCACTGCCCGTACCTCTCGACAAACAATTTGACTATGCCATCCCAGGACACCTGTT
TCCTATCATTGGCGGGCGCGTATCCGTACCTTTTGGACGTCAAACGTTAGTTGGCATCGTCACCGCGATGGTTAATCACT
CGGATTTCCCCAAAGATCAACTCAAGCCAATCAAAGCAGTTCTTGATTCTCAGCCGGTATGGCCTGAAAAGCTTTATTCG
TTGCTGATTTGGTGCAGCCAGTTCTACCAATACCCACTTGGAGATACGCTACACAATGCGATGCCAGCAGCTCTGCGTAA
AGGAAAGCCTGCAGATTTTGCGACGCTACAAGAGTGGCAAATTACCGAATCCGGTAAAGACAAGCTGATGCAAGGGCTTG
ATCGTCGAGCGATCAAACAACAGAAGGTCTTGCAAATGTTGGTTAACGGCGCTTTGCCTCACCAGGAATTTGTCGACCAA
GAGATAGCCTCAACTGTACTAAAGTCTTTAGAAGATAAAGGCTGGATTGAACGTATCGAGAAGAAGCCTGCAATCACCCA
GTGGGGACAGCACGTTGAATGCGACGTCGAGAAGCCAAAGCTCAACCACGAACAAGCGCTAGCTATTGCGAGCGTAAATA
GCCAAACAGGTTTTGCTTGCTATTTATTAGAAGGCGTCACGGGCTCAGGTAAGACAGAAGTGTACCTCAACCTGATCAAG
CCGGTCTTAGAGAAAGGTAAACAAGCCTTGGTTTTAGTACCAGAGATTGGCTTAACACCACAAACCATCAACCGCTTTAA
ACGCCGTTTTAATGTGCCAGTTGACGTTATCCACTCCGGATTAAACGAGACGGAACGTCTGAATGCGTGGCTTTCTGCAC
GCGACAAAGCGGCCGGAATCATTATCGGCACACGATCTGCCCTACTCGCGCCTTTTGCTGATCTCGGGATTATCATTGTG
GACGAGGAACATGACACCTCTTACAAACAGCAAGATAGCTTGCGTTATCATGCACGCGATGTTGCTGTAATGCGCGCCCA
TAAAGAACAAGTTCCGATTGTTCTGGGCTCAGCTACACCTGCACTGGAGACATTGCACAATGCCTTGTCAGGCAAGTATC
ACCATTTAACCCTGACCCAACGCGCAGGCTCTGCGGTTCCTACTTCTAATAAAGTGCTCGACGTCAAAGGTCAGTATTTA
GAAAGTGGTTTATCTGCCCCATTGATTGCGGAAATGCGCAAACACCTTAAAGCAGGCAATCAGGTGATGCTGTTTCTTAA
CCGTCGTGGTTTCTCCCCTGCTCTCATGTGTCATGAATGTGGTTGGATTGCCGAATGCAAACGTTGTGATGCTTATTACA
CCTTCCACCAATACAGCAATGAGATTCGTTGCCACCATTGTGGTTCACAGCAACCAGTGATTCATCAGTGTCAGGGCTGT
GGTTCAACTCAACTGGTTACCGTTGGTGTCGGTACCGAACAGTTAGAACAACAATTGGCACAACTGTTCCCCGAATACAA
AGCCATCCGTATCGACAGGGATAGCACGCGCCGAAAAGGCAGCTTAGAAGACGCGTTGGAATCCATCCGTAAGGGTGAAT
ATCAAATTTTGATTGGCACTCAAATGTTGGCTAAGGGACACCATTTCCCCAATGTAACGCTCGTCGCCTTGCTAGATGTT
GATGGCTCTCTATATAGTAGCGACTTTCGCGCCTCCGAAAGATTAGCGCAGCTATTCATTCAGGTCGCAGGACGAGCCGG
ACGTGCAAGTAAGCCGGGGGAAGTGGTTTTGCAGACTCACCATCCTGAGCACAGTTTGTTGCAAGCCTTATTGGAAAAGG
ACTACCGACACTTCGCTATGACGGCATTAGAGGAACGTAAACTGGCGCAGTTGCCACCGTACAGTTTCCTTACTCTATTT
AAAGCCGAAGCGAATCAGAGCGAGATCGTAGAAGATTTTCTGCGTCAAGTTCGCTTTACCTTAGAATCGCACCCTTTATT
TGACGACACCTGCATGGTGCTTGGTCCAACACCATCGCCTCTCGCCAAACGCGCAGGCAAATACCGTTGGCAGCTGTTAC
TCCAAACCCAGCACCGTTCATTAATGCAAAAGTTATTAACCAGTGCCAAACCTGCTATTGAGTTGTTGCCTAATGCCAAA
AAAGTTCGCTGGAATTTAGACATAGAACCACAAGATCTCAGCTAG

Domains

Predicted by InterProScan.

• 3DNA-binding domain (3BD) (PriA_3primeBD) (7-102)

• Helicase conserved C-terminal domain (Helicase_C) (500-589)

• DEAD/DEAH box helicase (DEAD) (220-365)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (446-472)

• Primosomal protein N C-terminal domain (PriA_C) (633-730)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	43.243	100	0.436