Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MKY62_RS06275 Genome accession   NZ_CP150217
Coordinates   1261546..1263375 (+) Length   609 a.a.
NCBI ID   WP_023856662.1    Uniprot ID   -
Organism   Bacillus sp. FSL R7-0646     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1256546..1268375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY62_RS06260 (MKY62_06260) - 1257728..1258447 (-) 720 WP_003180638.1 response regulator -
  MKY62_RS06265 (MKY62_06265) - 1258470..1260014 (-) 1545 WP_003180641.1 sensor histidine kinase -
  MKY62_RS06270 (MKY62_06270) - 1260185..1261333 (+) 1149 WP_003180643.1 competence protein CoiA family protein -
  MKY62_RS06275 (MKY62_06275) pepF 1261546..1263375 (+) 1830 WP_023856662.1 oligoendopeptidase F Regulator
  MKY62_RS06280 (MKY62_06280) - 1263433..1263600 (-) 168 WP_003180648.1 hypothetical protein -
  MKY62_RS06285 (MKY62_06285) spxH 1264012..1264914 (-) 903 WP_003180650.1 protease adaptor protein SpxH -
  MKY62_RS06290 (MKY62_06290) - 1264911..1265309 (-) 399 WP_339613996.1 thiol management oxidoreductase -
  MKY62_RS06295 (MKY62_06295) - 1265591..1266244 (-) 654 WP_003180655.1 lytic transglycosylase domain-containing protein -
  MKY62_RS06300 (MKY62_06300) - 1266257..1266829 (-) 573 WP_003180657.1 CYTH domain-containing protein -
  MKY62_RS06305 (MKY62_06305) - 1266960..1267325 (+) 366 WP_003180659.1 hypothetical protein -
  MKY62_RS06310 (MKY62_06310) - 1267357..1267992 (+) 636 WP_003180661.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 609 a.a.        Molecular weight: 70361.88 Da        Isoelectric Point: 4.8544

>NTDB_id=966647 MKY62_RS06275 WP_023856662.1 1261546..1263375(+) (pepF) [Bacillus sp. FSL R7-0646]
MAEEKKSKKLPSREEVKQEDTWRLEDIFPSDDAWSEEFQAVKELLPKLSEFKGRLGHSADDLYEALTYQDKVMERLGKLY
TYAHMRYDQDTGNSFYQGLNDKAANLYTQAASATAYMVPEILSIQEEKLQQFLLEKEELKLYSHALEEINKERPHVLSEE
EEGILAEASDVLSSSSNTFGMLNNADMEFPEITDENGEKVQLTHGNYVTFLESENRDVRRAAFKAVYETYGRFKNTLAST
LSGAVKKDNFYAKVKHYKSAREAALSRNSIPEEVYDNLVSTINKHLPLLHRYVELRKKVLELDEVHMYDLYTPLVKDSGM
KVTYEQAKDYMLKGLTPLGEEYSSILKEGLNNRWVDVYENKGKRSGAYSSGTYGTNPYILMNWQDNVNNLFTLVHEFGHS
VHSYYTRKYQPYPYGNYSIFVAEVASTTNEALLGEYLLNTIDDEKQRLYILNHMLEGFKGTVFRQTMFAEFEHEIHSKAQ
EGEPLTPELLTSIYYDLNKKYFGDNIEIDKEIGLEWSRIPHFYYNYYVYQYATGFSAAQALSQQILKEGKSAVDRYIEFL
KAGSSDYPIEVLKKAGVDMTSSEPIEAACKKFEEQLNEMEELLQKVNHS

Nucleotide


Download         Length: 1830 bp        

>NTDB_id=966647 MKY62_RS06275 WP_023856662.1 1261546..1263375(+) (pepF) [Bacillus sp. FSL R7-0646]
GTGGCTGAAGAAAAAAAATCGAAGAAACTGCCTTCAAGAGAAGAGGTGAAGCAAGAAGACACGTGGAGACTTGAGGATAT
CTTCCCGTCAGATGATGCTTGGAGCGAGGAATTTCAAGCCGTTAAAGAACTGCTGCCCAAGCTTTCCGAATTCAAGGGCA
GGCTCGGCCATTCCGCCGATGATCTATATGAAGCGCTGACTTATCAGGATAAGGTGATGGAGCGTCTCGGGAAGCTGTAT
ACTTACGCTCACATGCGCTATGATCAGGATACTGGAAATTCTTTTTACCAAGGTCTCAATGATAAAGCGGCCAACCTCTA
TACCCAGGCTGCGAGCGCGACGGCCTACATGGTGCCGGAAATACTATCGATTCAAGAAGAAAAGCTTCAGCAGTTCCTGC
TGGAAAAAGAGGAGTTAAAGCTTTACTCGCATGCTCTCGAAGAAATCAATAAAGAGCGTCCTCACGTACTGAGCGAGGAG
GAGGAAGGAATTTTGGCCGAAGCGTCTGATGTTCTTTCATCTTCTTCCAACACGTTCGGCATGCTGAATAACGCCGATAT
GGAATTTCCGGAGATCACCGATGAAAATGGAGAAAAGGTACAGCTCACACACGGCAATTATGTCACCTTTTTGGAAAGCG
AGAACCGCGATGTCCGCCGCGCGGCATTCAAGGCGGTTTACGAAACATACGGCCGCTTTAAAAACACGCTCGCTTCCACG
CTCAGCGGAGCTGTGAAAAAAGACAACTTTTATGCGAAGGTTAAACATTATAAATCGGCGCGGGAAGCTGCTTTGTCGCG
AAACAGCATTCCTGAAGAAGTCTATGACAATCTTGTCAGCACGATCAACAAGCATCTCCCGCTTCTTCACCGCTATGTTG
AACTTAGAAAAAAAGTGCTTGAGCTTGATGAAGTACACATGTATGACCTGTATACTCCGCTGGTAAAGGACTCTGGAATG
AAAGTTACCTACGAGCAGGCCAAGGACTATATGCTAAAAGGTTTGACGCCTTTAGGGGAAGAATATTCATCCATCCTGAA
AGAAGGCTTGAACAACCGCTGGGTCGATGTGTATGAAAACAAAGGAAAACGCAGCGGCGCTTATTCTTCAGGAACTTACG
GAACAAATCCGTATATTTTGATGAACTGGCAGGACAACGTCAATAATTTGTTTACGCTCGTCCATGAATTCGGCCATTCC
GTGCACAGCTACTATACGAGAAAATATCAGCCTTACCCGTACGGAAACTACAGCATTTTCGTAGCCGAAGTAGCTTCTAC
GACGAATGAAGCACTTTTGGGAGAATACTTGCTGAATACAATCGACGATGAAAAACAGCGGCTCTACATTTTGAATCATA
TGCTTGAAGGCTTCAAAGGAACGGTTTTCAGACAGACGATGTTTGCCGAATTTGAACATGAGATCCATAGCAAAGCCCAG
GAAGGGGAACCGCTGACACCTGAGCTGTTAACGAGCATCTACTATGATTTGAATAAGAAATATTTCGGTGACAATATTGA
GATTGATAAGGAAATCGGTCTTGAGTGGTCAAGAATACCGCATTTCTATTACAATTATTATGTGTATCAGTATGCGACAG
GCTTCAGTGCAGCCCAGGCACTCAGTCAGCAGATTTTAAAAGAAGGCAAATCGGCTGTTGACCGCTATATTGAGTTCTTG
AAAGCTGGAAGCTCGGATTATCCGATTGAAGTGCTGAAAAAAGCCGGCGTCGATATGACGTCTTCAGAGCCGATCGAAGC
TGCGTGCAAAAAGTTTGAAGAGCAGCTGAACGAAATGGAAGAACTTTTGCAAAAAGTCAATCATTCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(210-589)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.419

98.03

0.494

Multiple sequence alignment