Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKY82_RS22790 Genome accession   NZ_CP150215
Coordinates   5073832..5074785 (-) Length   317 a.a.
NCBI ID   WP_071219984.1    Uniprot ID   A0A1S2F668
Organism   Paenibacillus sp. FSL W7-1279     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5068832..5079785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY82_RS22770 (MKY82_22770) - 5069365..5070789 (-) 1425 WP_339294409.1 NAD-dependent succinate-semialdehyde dehydrogenase -
  MKY82_RS22775 (MKY82_22775) - 5070969..5071940 (-) 972 WP_339294410.1 siderophore ABC transporter substrate-binding protein -
  MKY82_RS22780 (MKY82_22780) - 5072140..5072898 (-) 759 WP_076325073.1 ABC transporter ATP-binding protein -
  MKY82_RS22785 (MKY82_22785) - 5072895..5073842 (-) 948 WP_071219986.1 iron chelate uptake ABC transporter family permease subunit -
  MKY82_RS22790 (MKY82_22790) ceuB 5073832..5074785 (-) 954 WP_071219984.1 ABC transporter permease Machinery gene
  MKY82_RS22795 (MKY82_22795) - 5075316..5075918 (+) 603 WP_194543645.1 nitroreductase family protein -
  MKY82_RS22800 (MKY82_22800) - 5076291..5076896 (+) 606 WP_339294411.1 YkoF family thiamine/hydroxymethylpyrimidine-binding protein -
  MKY82_RS22805 (MKY82_22805) - 5076969..5077067 (-) 99 WP_194543647.1 YjcZ family sporulation protein -
  MKY82_RS22810 (MKY82_22810) - 5077185..5077883 (-) 699 WP_194543648.1 nucleotidyltransferase domain-containing protein -
  MKY82_RS22815 (MKY82_22815) - 5078028..5078750 (+) 723 WP_339294412.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34958.40 Da        Isoelectric Point: 10.0377

>NTDB_id=966582 MKY82_RS22790 WP_071219984.1 5073832..5074785(-) (ceuB) [Paenibacillus sp. FSL W7-1279]
MKIRYLFAAVVVLSIISLFIGVKDISPLQLFSMTEQQQHIMLVSRIPRLVSLILAGVSMSICGLIMQQLSRNKFVSPTTA
GTMDSARLGILVAMLVFTTSGPLIKMLVAFVFALAGTFIFMKILDRIKFKDAIFIPLVGLMFGNIVSSIATFFAYKYDLI
QNMSAWLQGDFSMIMKGQYEMLYLSIPLVILAYLFANKFTVAGMGEEFATNLGLHYRRVVNLGLVIVALVTASVVLTVGV
IPFLGLIIPNIVSLYLGDHLKKSLSHTALLGAGFVLFCDILGRIIIYPYEIPISLTVGVLGSGIFIFLLMRRKAYDL

Nucleotide


Download         Length: 954 bp        

>NTDB_id=966582 MKY82_RS22790 WP_071219984.1 5073832..5074785(-) (ceuB) [Paenibacillus sp. FSL W7-1279]
ATGAAGATTAGATACTTATTTGCAGCCGTTGTGGTACTCTCGATAATCTCATTATTTATTGGAGTTAAGGATATCTCGCC
ACTGCAATTGTTCTCGATGACAGAACAACAACAGCATATTATGCTTGTCAGCCGGATTCCTAGGCTTGTCAGTCTCATAT
TGGCGGGTGTCAGCATGAGCATCTGCGGATTGATCATGCAGCAGCTCAGCCGCAATAAGTTCGTATCGCCCACCACGGCA
GGTACGATGGACTCTGCCAGACTGGGGATATTGGTAGCCATGCTTGTCTTCACGACAAGCGGACCGCTTATCAAAATGCT
TGTGGCATTTGTATTCGCTCTGGCAGGAACCTTTATCTTCATGAAGATACTGGATCGGATTAAGTTCAAGGATGCGATCT
TCATCCCGCTCGTAGGGCTGATGTTCGGTAATATCGTCAGTTCGATCGCCACCTTCTTTGCATACAAATATGATCTTATT
CAGAATATGTCCGCATGGCTCCAGGGTGATTTTTCCATGATCATGAAGGGCCAGTATGAAATGCTCTATCTTAGTATCCC
GCTTGTGATTCTGGCGTATCTGTTCGCCAACAAGTTTACGGTGGCCGGAATGGGAGAGGAGTTTGCTACCAACCTGGGCC
TTCACTACCGGAGAGTTGTGAATCTGGGACTGGTCATCGTGGCGCTGGTTACGGCTTCCGTCGTGCTGACGGTCGGCGTG
ATTCCGTTTCTTGGTCTGATCATACCTAATATTGTTAGTTTGTACTTAGGAGACCATTTGAAAAAAAGCCTTTCGCATAC
CGCGCTGCTGGGGGCCGGTTTCGTACTGTTCTGTGACATCCTGGGCCGGATCATTATTTATCCCTATGAAATTCCGATTA
GTCTAACCGTGGGCGTACTCGGAAGCGGTATATTCATTTTCTTACTGATGAGGAGAAAGGCTTATGACTTATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1S2F668

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.286

99.369

0.539

Multiple sequence alignment