Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | AABJ90_RS12630 | Genome accession | NZ_AP028964 |
| Coordinates | 2484577..2485602 (-) | Length | 341 a.a. |
| NCBI ID | WP_338382004.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain NA05 = NBRC 116153 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2479577..2490602
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABJ90_RS12595 (BsubNA05_24400) | - | 2480062..2480958 (-) | 897 | WP_247471624.1 | 2-dehydropantoate 2-reductase | - |
| AABJ90_RS12600 (BsubNA05_24410) | ylbP | 2481118..2481600 (+) | 483 | WP_014476736.1 | N-acetyltransferase | - |
| AABJ90_RS12605 (BsubNA05_24420) | gerR | 2481657..2482238 (-) | 582 | WP_015715842.1 | sporulation specific transcriptional regulator GerR | - |
| AABJ90_RS12610 (BsubNA05_24430) | rpmF | 2482384..2482563 (-) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| AABJ90_RS12615 (BsubNA05_24440) | ylbN | 2482585..2483103 (-) | 519 | WP_014479718.1 | DUF177 domain-containing protein | - |
| AABJ90_RS12620 (BsubNA05_24450) | - | 2483131..2483316 (+) | 186 | WP_003232215.1 | hypothetical protein | - |
| AABJ90_RS12625 (BsubNA05_24460) | ylbM | 2483313..2484560 (+) | 1248 | WP_122894564.1 | nucleotidyltransferase | - |
| AABJ90_RS12630 (BsubNA05_24470) | sepM | 2484577..2485602 (-) | 1026 | WP_338382004.1 | protease DdcP | Regulator |
| AABJ90_RS12635 (BsubNA05_24480) | ylbK | 2485604..2486386 (-) | 783 | WP_003232221.1 | patatin family protein | - |
| AABJ90_RS12640 (BsubNA05_24490) | spoVV | 2486567..2487793 (+) | 1227 | WP_015252149.1 | dipicolinic acid transporter SpoVV | - |
| AABJ90_RS12645 (BsubNA05_24500) | coaD | 2487804..2488289 (-) | 486 | WP_003245283.1 | pantetheine-phosphate adenylyltransferase | - |
| AABJ90_RS12650 (BsubNA05_24510) | rsmD | 2488294..2488848 (-) | 555 | WP_029317761.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| AABJ90_RS12655 (BsubNA05_24520) | ylbG | 2489171..2489443 (-) | 273 | WP_015715839.1 | YlbG family protein | - |
| AABJ90_RS12660 (BsubNA05_24530) | ylbF | 2489498..2489947 (-) | 450 | WP_003221370.1 | regulatory iron-sulfur-containing complex subunit RicF | Regulator |
| AABJ90_RS12665 (BsubNA05_24540) | ylbE | 2490063..2490302 (-) | 240 | WP_003232231.1 | YlbE-like family protein | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37679.29 Da Isoelectric Point: 6.5347
>NTDB_id=96650 AABJ90_RS12630 WP_338382004.1 2484577..2485602(-) (sepM) [Bacillus subtilis strain NA05 = NBRC 116153]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKIEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNALKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKIEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNALKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST
Nucleotide
Download Length: 1026 bp
>NTDB_id=96650 AABJ90_RS12630 WP_338382004.1 2484577..2485602(-) (sepM) [Bacillus subtilis strain NA05 = NBRC 116153]
TTGCTACGAAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGTTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGATAGAGCCTGATATTGATTTTGAAATTGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCATTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
TTGCTACGAAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGCC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAGTCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGTTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGATAGAGCCTGATATTGATTTTGAAATTGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACCATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCATTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
39.143 |
100 |
0.402 |