Detailed information NTG0966478

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ACKN8R_RS03195
• Genome accession: NZ_CP176031
• Coordinates: 670207..672411 (-)
• Length: 734 a.a.
• NCBI ID: WP_140201821.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain L2171
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 665207..677411

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKN8R_RS03170 (ACKN8R_03170)	-	665434..665658 (+)	225	WP_024703419.1	hypothetical protein	-
ACKN8R_RS03175 (ACKN8R_03175)	hslU	666074..667405 (-)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
ACKN8R_RS03180 (ACKN8R_03180)	hslV	667429..667980 (-)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
ACKN8R_RS03185 (ACKN8R_03185)	ftsN	668145..668690 (-)	546	WP_005481405.1	cell division protein FtsN	-
ACKN8R_RS03190 (ACKN8R_03190)	cytR	668867..669913 (-)	1047	WP_254894148.1	DNA-binding transcriptional regulator CytR	Regulator
ACKN8R_RS03195 (ACKN8R_03195)	priA	670207..672411 (-)	2205	WP_140201821.1	primosomal protein N'	Machinery gene
ACKN8R_RS03200 (ACKN8R_03200)	rpmE	672706..672927 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
ACKN8R_RS03205 (ACKN8R_03205)	rpsJ	673385..673696 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
ACKN8R_RS03210 (ACKN8R_03210)	rplC	673711..674340 (+)	630	WP_005456132.1	50S ribosomal protein L3	-
ACKN8R_RS03215 (ACKN8R_03215)	rplD	674358..674960 (+)	603	WP_005379556.1	50S ribosomal protein L4	-
ACKN8R_RS03220 (ACKN8R_03220)	rplW	674957..675259 (+)	303	WP_004398471.1	50S ribosomal protein L23	-
ACKN8R_RS03225 (ACKN8R_03225)	rplB	675275..676099 (+)	825	WP_005489461.1	50S ribosomal protein L2	-
ACKN8R_RS03230 (ACKN8R_03230)	rpsS	676121..676399 (+)	279	WP_004394525.1	30S ribosomal protein S19	-
ACKN8R_RS03235 (ACKN8R_03235)	rplV	676410..676742 (+)	333	WP_005383164.1	50S ribosomal protein L22	-

Sequence

Protein

• Length: 734 a.a.
• Molecular weight: 82255.83 Da
• Isoelectric Point: 8.5714

>NTDB_id=966478 ACKN8R_RS03195 WP_140201821.1 670207..672411(-) (priA) [Vibrio parahaemolyticus strain L2171]
MRPSIARVALPVPLDKQFDYAIPGHLFPIIGGRVSVPFGRQTLVGIVTAMVNHSDFPKDQLKPIKAVLDSQPVWPEKLYS
LLIWCSQFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQITESGKDKLMQGLDRRAIKQQKVLQMLVNGALPHQEFVDQ
EIASTVLKSLEDKGWIERIEKKPAITQWGQHVECDVEKPKLNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIK
PVLEKGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNETERLNAWLSARDKAAGIIIGTRSALLAPFADLGIIIV
DEEHDTSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATPALETLHNALSGKYHHLTLTQRAGSAVPTSNKVLDVKGQYL
ESGLSAPLIAEMRKHLKAGNQVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVIHQCQGC
GSTQLVTVGVGTEQLEQQLAQLFPEYKAIRIDRDSTRRKGSLEDALESIRKGEYQILIGTQMLAKGHHFPNVTLVALLDV
DGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHPEHSLLQALLEKDYRHFAMTALEERKLAQLPPYSFLTLF
KAEANQSEIVEDFLRQVRFTLESHPLFDDTCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLTSAKPAIELLPNAK
KVRWNLDIEPQDLS

Nucleotide

• Length: 2205 bp

>NTDB_id=966478 ACKN8R_RS03195 WP_140201821.1 670207..672411(-) (priA) [Vibrio parahaemolyticus strain L2171]
ATGCGTCCATCCATTGCTAGAGTGGCACTGCCCGTACCTCTCGACAAACAATTTGACTATGCCATCCCAGGACACCTGTT
TCCTATCATTGGCGGGCGCGTATCCGTACCTTTTGGACGTCAAACGTTAGTTGGCATCGTCACCGCGATGGTTAATCACT
CGGATTTCCCCAAAGATCAACTCAAGCCAATCAAAGCAGTTCTTGATTCTCAGCCGGTATGGCCTGAAAAGCTTTATTCG
TTGCTGATTTGGTGCAGCCAGTTCTACCAATACCCACTTGGAGATACGCTACACAATGCGATGCCAGCAGCTCTGCGTAA
AGGAAAGCCTGCAGATTTTGCGACGCTACAAGAGTGGCAAATTACCGAATCCGGTAAAGACAAGCTGATGCAAGGGCTTG
ATCGTCGAGCGATCAAACAACAGAAGGTCTTGCAAATGTTGGTTAACGGCGCTTTGCCTCACCAGGAATTTGTCGACCAA
GAGATAGCCTCAACTGTACTAAAGTCTTTAGAAGATAAAGGCTGGATTGAACGTATCGAGAAGAAGCCTGCAATCACCCA
GTGGGGACAGCACGTTGAATGCGACGTCGAGAAGCCAAAGCTCAACCACGAACAAGCGCTAGCTATTGCGAGCGTAAATA
GCCAAACAGGTTTTGCTTGCTATTTATTAGAAGGCGTCACGGGCTCAGGTAAGACAGAAGTGTACCTCAACCTGATCAAG
CCGGTCTTAGAGAAAGGTAAACAAGCCTTGGTTTTAGTACCAGAGATTGGCTTAACACCACAAACCATCAACCGCTTTAA
ACGCCGTTTTAATGTGCCAGTTGACGTTATCCACTCCGGATTAAACGAGACGGAACGTCTGAATGCGTGGCTTTCTGCAC
GCGACAAAGCGGCCGGAATCATTATCGGCACACGATCTGCCCTACTCGCGCCTTTTGCTGATCTCGGGATTATCATTGTG
GACGAGGAACATGACACCTCTTACAAACAGCAAGATAGCTTGCGTTATCATGCACGCGATGTTGCTGTAATGCGCGCCCA
TAAAGAACAAGTTCCGATTGTTCTGGGCTCAGCTACACCTGCACTGGAGACATTGCACAATGCCTTGTCAGGCAAGTATC
ACCATTTAACCCTGACCCAACGCGCAGGCTCTGCGGTTCCTACTTCTAATAAAGTGCTCGACGTCAAAGGTCAGTATTTA
GAAAGTGGTTTATCTGCCCCATTGATTGCGGAAATGCGCAAACACCTTAAAGCAGGCAATCAGGTGATGCTGTTTCTTAA
CCGTCGTGGTTTCTCCCCTGCTCTCATGTGTCATGAATGTGGTTGGATTGCCGAATGCAAACGTTGTGATGCTTATTACA
CCTTCCACCAATACAGCAATGAGATTCGTTGCCACCATTGTGGTTCACAGCAACCAGTGATTCATCAGTGTCAGGGCTGT
GGTTCAACTCAACTGGTTACCGTTGGTGTCGGTACCGAACAGTTAGAACAACAATTGGCACAACTGTTCCCCGAATACAA
AGCCATCCGTATCGACAGGGATAGCACGCGCCGAAAAGGCAGCTTAGAAGACGCGTTGGAATCCATCCGTAAGGGTGAAT
ATCAAATTTTGATTGGCACTCAAATGTTGGCTAAGGGACACCATTTCCCCAATGTAACGCTCGTCGCCTTGCTAGATGTT
GATGGCTCTCTATATAGTAGCGACTTTCGCGCCTCCGAAAGATTAGCGCAGCTATTCATTCAGGTCGCAGGACGAGCCGG
ACGTGCAAGTAAGCCGGGGGAAGTGGTTTTGCAGACTCACCATCCTGAGCACAGTTTGTTGCAAGCCTTATTGGAAAAGG
ACTACCGACACTTCGCTATGACGGCATTAGAGGAACGTAAACTGGCGCAGTTGCCACCGTACAGTTTCCTTACTCTATTT
AAAGCCGAAGCGAATCAGAGCGAGATCGTAGAAGATTTTCTGCGTCAAGTTCGCTTTACCTTAGAATCGCACCCTTTATT
TGACGACACCTGCATGGTGCTTGGTCCAACACCATCGCCTCTCGCCAAACGCGCAGGCAAATACCGTTGGCAGCTGTTAC
TCCAAACCCAGCACCGTTCATTAATGCAAAAGTTATTAACCAGTGCCAAACCTGCTATTGAGTTGTTGCCTAATGCCAAA
AAAGTTCGCTGGAATTTAGACATAGAACCACAAGATCTCAGCTAG

Domains

Predicted by InterProScan.

• 3DNA-binding domain (3BD) (PriA_3primeBD) (7-102)

• Helicase conserved C-terminal domain (Helicase_C) (500-589)

• DEAD/DEAH box helicase (DEAD) (220-365)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (446-472)

• Primosomal protein N C-terminal domain (PriA_C) (633-730)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	43.243	100	0.436