Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MKY07_RS11630 Genome accession   NZ_CP150208
Coordinates   2340223..2341914 (-) Length   563 a.a.
NCBI ID   WP_014823484.1    Uniprot ID   F2F933
Organism   Solibacillus sp. FSL W7-1472     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2335223..2346914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY07_RS11610 (MKY07_11610) - 2336568..2337002 (-) 435 WP_065215711.1 hypothetical protein -
  MKY07_RS11615 (MKY07_11615) - 2337348..2337824 (+) 477 WP_339262279.1 DNA polymerase III subunit alpha -
  MKY07_RS11620 (MKY07_11620) spo0A 2337973..2338764 (-) 792 WP_014823486.1 sporulation transcription factor Spo0A -
  MKY07_RS11625 (MKY07_11625) - 2339109..2340035 (-) 927 WP_008404226.1 SpoIVB peptidase S55 domain-containing protein -
  MKY07_RS11630 (MKY07_11630) recN 2340223..2341914 (-) 1692 WP_014823484.1 DNA repair protein RecN Machinery gene
  MKY07_RS11635 (MKY07_11635) argR 2341931..2342380 (-) 450 WP_008404230.1 transcriptional regulator ArgR -
  MKY07_RS11640 (MKY07_11640) - 2342779..2343597 (-) 819 WP_008404232.1 TlyA family RNA methyltransferase -
  MKY07_RS11645 (MKY07_11645) dxs 2343601..2345499 (-) 1899 WP_008404233.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MKY07_RS11650 (MKY07_11650) - 2345589..2346473 (-) 885 WP_339262285.1 polyprenyl synthetase family protein -
  MKY07_RS11655 (MKY07_11655) xseB 2346477..2346704 (-) 228 WP_008404237.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 563 a.a.        Molecular weight: 63683.22 Da        Isoelectric Point: 4.7270

>NTDB_id=966401 MKY07_RS11630 WP_014823484.1 2340223..2341914(-) (recN) [Solibacillus sp. FSL W7-1472]
MLRELSIRNFAIIDDLTVSFFGGLTVLTGETGAGKSIIIDAVNILAGGRGSTEFIRHGEKKAELGGLFHVDNSQHPIFAK
LEEHGIESEEDTIILRRDLHDSGKSVCRVNGKLVPLSVLRDIGGSLIDIHGQHENQELMDEKFHINLLDHYAHNKLQPVK
ARYDEAFEAYRQLKREVAELSMDEQRMAQRIDLYQFQIQELEQAGLKVDEEEALDEERLRLMNFHKIFERANIAYSAISD
DGTGLDFIGNAMNALEDIVALDSNFKEASEAVTSSFYALQDAAYQVKNVLDDLEYDAERLNEVEQRLALYQNMKRKYGTT
VEEILTYHEKIEEELSQLMNRDETLQKNEQLLAKMEADLNKIAEELTTIRKENAIKLSDAIMNELRMLHMEKAQFIVKFE
PLNQLDANGKDFVAFYISTNVGEPPKSLPKVASGGELSRMMLALKTIFSSSNGITSIIFDEVDTGVSGRVAQAIAEKIAA
ISVNSQVLCISHLPQVAAMADHHYYIKKQVEHNRTFTSITEMEEKERIVEISRMMSGAEITDLTLQHASELIHMANERKE
MMN

Nucleotide


Download         Length: 1692 bp        

>NTDB_id=966401 MKY07_RS11630 WP_014823484.1 2340223..2341914(-) (recN) [Solibacillus sp. FSL W7-1472]
TTGTTAAGAGAATTAAGCATTCGAAATTTTGCTATTATTGATGATTTAACCGTTAGTTTTTTTGGTGGTTTAACTGTTTT
GACAGGTGAAACAGGCGCCGGAAAATCGATTATTATTGATGCGGTTAATATATTGGCTGGCGGGCGCGGTTCAACGGAGT
TTATCCGCCACGGAGAGAAAAAGGCTGAACTTGGCGGATTATTTCATGTAGATAATAGTCAGCATCCCATTTTTGCAAAA
CTTGAAGAACATGGGATTGAATCAGAAGAAGATACGATTATTTTACGACGGGACCTGCATGATTCAGGAAAAAGCGTTTG
CAGAGTGAACGGCAAACTTGTCCCATTATCTGTTTTGCGTGATATTGGCGGCAGTTTAATTGATATTCATGGGCAACATG
AAAACCAGGAGCTTATGGATGAAAAATTCCATATCAATTTACTGGATCATTATGCACATAATAAGCTTCAGCCTGTGAAA
GCAAGGTACGATGAAGCGTTTGAAGCGTATCGTCAGTTAAAAAGAGAAGTGGCTGAGCTAAGTATGGACGAGCAGCGGAT
GGCACAGCGCATTGATTTATATCAATTCCAAATTCAGGAGCTGGAACAGGCCGGATTAAAAGTTGACGAAGAAGAAGCAT
TGGATGAAGAACGACTTCGTTTAATGAATTTCCATAAAATATTCGAACGTGCGAATATTGCATATTCAGCGATTTCCGAT
GATGGAACCGGACTGGATTTCATTGGTAATGCCATGAATGCACTGGAGGATATTGTTGCACTCGATTCGAATTTCAAAGA
GGCTTCAGAAGCGGTCACTTCCAGCTTTTATGCATTACAGGATGCAGCATATCAAGTGAAAAATGTGCTGGATGATTTAG
AGTATGACGCTGAGCGTTTGAATGAGGTCGAGCAGCGTCTTGCTTTATATCAAAATATGAAACGTAAGTATGGAACGACA
GTTGAAGAGATTTTAACGTATCACGAAAAAATCGAAGAAGAGTTGAGCCAGCTTATGAACCGAGATGAAACATTGCAGAA
AAATGAGCAATTGCTGGCGAAAATGGAAGCAGACTTAAATAAAATTGCAGAAGAATTGACGACAATCCGCAAAGAAAATG
CAATTAAGCTAAGTGATGCGATTATGAATGAACTACGTATGCTGCATATGGAAAAAGCGCAGTTTATCGTTAAATTCGAG
CCATTGAATCAGCTGGACGCAAACGGCAAGGATTTTGTCGCATTCTATATTTCAACAAATGTTGGGGAACCACCGAAATC
CTTGCCTAAAGTCGCTTCCGGAGGGGAACTTTCCCGTATGATGTTGGCACTTAAAACAATTTTCTCTTCATCAAATGGTA
TTACGTCAATTATTTTTGATGAGGTTGATACAGGTGTCAGCGGACGTGTAGCACAGGCAATTGCAGAAAAGATTGCAGCA
ATTTCAGTCAATTCACAAGTATTATGTATTTCTCACTTGCCGCAAGTTGCTGCAATGGCGGATCATCATTACTACATTAA
AAAGCAAGTAGAGCATAACCGTACATTTACGTCGATTACGGAAATGGAAGAAAAGGAACGAATCGTGGAGATCAGCCGCA
TGATGAGTGGAGCTGAAATAACAGACCTGACATTACAACATGCTTCGGAATTAATTCATATGGCCAATGAACGTAAAGAA
ATGATGAACTAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F2F933

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

52.962

100

0.54

Multiple sequence alignment