Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MKY13_RS18750 Genome accession   NZ_CP150204
Coordinates   3671450..3672406 (-) Length   318 a.a.
NCBI ID   WP_191701391.1    Uniprot ID   -
Organism   Solibacillus sp. FSL W8-0372     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3666450..3677406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY13_RS18720 (MKY13_18720) zupT 3666450..3667271 (-) 822 WP_191701385.1 zinc transporter ZupT -
  MKY13_RS18725 (MKY13_18725) - 3667410..3668012 (-) 603 WP_339214415.1 phosphatase PAP2 family protein -
  MKY13_RS18730 (MKY13_18730) - 3668131..3668463 (-) 333 WP_191701387.1 antibiotic biosynthesis monooxygenase -
  MKY13_RS18735 (MKY13_18735) - 3668527..3669564 (-) 1038 WP_339214417.1 siderophore ABC transporter substrate-binding protein -
  MKY13_RS18740 (MKY13_18740) - 3669743..3670510 (-) 768 WP_339214419.1 ATP-binding cassette domain-containing protein -
  MKY13_RS18745 (MKY13_18745) - 3670507..3671463 (-) 957 WP_339214421.1 iron chelate uptake ABC transporter family permease subunit -
  MKY13_RS18750 (MKY13_18750) ceuB 3671450..3672406 (-) 957 WP_191701391.1 ABC transporter permease Machinery gene
  MKY13_RS18755 (MKY13_18755) menC 3673537..3674646 (-) 1110 WP_339214423.1 o-succinylbenzoate synthase -
  MKY13_RS18760 (MKY13_18760) - 3674718..3675551 (-) 834 WP_191701393.1 GNAT family N-acetyltransferase -
  MKY13_RS18765 (MKY13_18765) - 3675864..3677348 (-) 1485 WP_191701394.1 peptide MFS transporter -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34824.04 Da        Isoelectric Point: 9.5449

>NTDB_id=966289 MKY13_RS18750 WP_191701391.1 3671450..3672406(-) (ceuB) [Solibacillus sp. FSL W8-0372]
MRLWMLVAATIVLSFISLFIGAIDIKPSDLLDWDSDKTQIFLMSRVPRLMAIILAGAGMGISGLIMQSLSRNKFVSPTTS
GTLDAAKLGIVVSMVFFTSVGYMEKILFSFTFALIGMMIFMRLLESIKFKDVIFVPLIGIMYGNIIGAISTFIAYEADVM
QSVDTFFLGSFTLVVSGRYELLYVAVPAIILAYLYANKFTVAGMGEDFAKNLGLSYRTVLNLGLVLVAIISTTVVLTVGI
IPFLGLIVPNIVSLYMGDNLRKTIPHTIFLGAAFLLMCDILSRLIVYPFEIPVNTTVAVIGSAIFLVMLFRGKAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=966289 MKY13_RS18750 WP_191701391.1 3671450..3672406(-) (ceuB) [Solibacillus sp. FSL W8-0372]
ATGAGACTTTGGATGCTCGTTGCAGCAACCATCGTTCTGTCCTTTATATCATTATTTATTGGGGCAATCGACATTAAACC
ATCTGATTTATTGGATTGGGATTCAGATAAAACACAAATTTTCCTGATGAGTCGAGTGCCACGATTAATGGCGATTATAC
TTGCTGGGGCAGGGATGGGTATTTCAGGCTTAATTATGCAAAGCTTAAGCCGTAATAAATTCGTATCACCGACAACATCG
GGTACGTTGGATGCGGCTAAACTAGGTATTGTAGTATCGATGGTATTTTTCACAAGTGTAGGTTATATGGAGAAAATTCT
CTTTAGTTTCACCTTTGCACTTATTGGTATGATGATTTTCATGCGTCTTCTGGAAAGTATTAAATTTAAAGATGTAATTT
TCGTGCCTCTAATCGGGATTATGTACGGGAATATCATAGGTGCTATATCCACATTTATTGCCTATGAAGCAGATGTAATG
CAAAGTGTGGATACATTCTTTTTAGGTAGTTTTACACTAGTTGTTTCAGGACGTTATGAGTTGCTTTATGTAGCTGTACC
TGCGATTATTCTTGCTTACTTATATGCAAATAAGTTTACAGTGGCAGGAATGGGTGAAGATTTTGCGAAAAATCTAGGGT
TGAGCTATCGTACTGTATTAAATCTCGGTTTAGTGCTTGTCGCGATTATTTCAACTACAGTCGTATTAACAGTAGGGATT
ATTCCTTTCTTAGGGTTAATCGTGCCAAACATAGTTTCATTATATATGGGAGACAATTTACGTAAAACGATTCCGCATAC
AATTTTCCTAGGGGCAGCATTCCTATTGATGTGTGATATCCTGAGTCGTCTTATTGTGTATCCGTTTGAAATTCCGGTAA
ACACAACGGTTGCGGTAATCGGCAGTGCAATCTTCTTAGTAATGTTGTTTAGGGGGAAAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.949

99.371

0.506

Multiple sequence alignment