Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   NSQ79_RS06490 Genome accession   NZ_CP150200
Coordinates   1444556..1444858 (-) Length   100 a.a.
NCBI ID   WP_049528689.1    Uniprot ID   A0AAW7PKV4
Organism   Streptococcus sp. FSL W7-1342     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1439556..1449858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ79_RS06480 (NSQ79_06480) - 1440241..1441380 (-) 1140 WP_164332213.1 AbiH family protein -
  NSQ79_RS06485 (NSQ79_06485) - 1441402..1444392 (-) 2991 WP_175062565.1 type I restriction endonuclease subunit R -
  NSQ79_RS06490 (NSQ79_06490) HI0659 1444556..1444858 (-) 303 WP_049528689.1 helix-turn-helix transcriptional regulator Machinery gene
  NSQ79_RS06495 (NSQ79_06495) - 1444860..1445213 (-) 354 WP_045001823.1 type II toxin-antitoxin system RelE/ParE family toxin -
  NSQ79_RS06500 (NSQ79_06500) - 1445451..1446215 (-) 765 WP_061652208.1 SDR family NAD(P)-dependent oxidoreductase -
  NSQ79_RS06505 (NSQ79_06505) - 1446230..1447402 (-) 1173 WP_045771825.1 Mbeg1-like protein -
  NSQ79_RS06510 (NSQ79_06510) - 1447512..1448138 (+) 627 WP_045771826.1 Pr6Pr family membrane protein -
  NSQ79_RS06515 (NSQ79_06515) - 1448176..1449018 (-) 843 WP_164332211.1 HAD family hydrolase -
  NSQ79_RS06520 (NSQ79_06520) - 1449170..1449559 (+) 390 WP_118058024.1 sodium transporter -

Sequence

Protein


Download         Length: 100 a.a.        Molecular weight: 10964.95 Da        Isoelectric Point: 9.7589

>NTDB_id=966108 NSQ79_RS06490 WP_049528689.1 1444556..1444858(-) (HI0659) [Streptococcus sp. FSL W7-1342]
MTLEKNPAIGSSWDDLQKTIFTKEEIAASELRVALMLEIIDARKKQGISQKKLEELSGVKQPVIARMEIGKTAPQLDTVL
KILASLGKTLAVVPLDSHVK

Nucleotide


Download         Length: 303 bp        

>NTDB_id=966108 NSQ79_RS06490 WP_049528689.1 1444556..1444858(-) (HI0659) [Streptococcus sp. FSL W7-1342]
ATGACCCTAGAAAAGAATCCAGCAATTGGAAGTAGTTGGGATGATTTACAGAAAACTATTTTCACTAAAGAGGAAATTGC
GGCGAGTGAACTCCGTGTCGCACTGATGCTTGAGATTATTGATGCTCGTAAAAAACAAGGCATTTCCCAAAAGAAACTTG
AAGAGTTAAGTGGTGTCAAACAACCTGTTATCGCACGTATGGAGATAGGTAAAACAGCACCTCAGTTAGATACGGTTCTT
AAAATACTGGCGAGTCTAGGTAAGACATTGGCGGTAGTCCCACTTGATTCACATGTGAAGTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

60.92

87

0.53

Multiple sequence alignment