Detailed information    

insolico Bioinformatically predicted

Overview


Name   pepF   Type   Regulator
Locus tag   NSQ79_RS02235 Genome accession   NZ_CP150200
Coordinates   427635..429440 (+) Length   601 a.a.
NCBI ID   WP_014633523.1    Uniprot ID   A0AAW7PNL3
Organism   Streptococcus sp. FSL W7-1342     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context


Location: 422635..434440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ79_RS02220 (NSQ79_02220) - 423194..424033 (+) 840 WP_002886729.1 CHAP domain-containing protein -
  NSQ79_RS02225 (NSQ79_02225) - 424360..425341 (-) 982 Protein_377 IS3 family transposase -
  NSQ79_RS02230 (NSQ79_02230) - 426665..427624 (+) 960 WP_049529144.1 competence protein CoiA family protein -
  NSQ79_RS02235 (NSQ79_02235) pepF 427635..429440 (+) 1806 WP_014633523.1 oligoendopeptidase F Regulator
  NSQ79_RS02240 (NSQ79_02240) - 429653..430873 (+) 1221 WP_049529141.1 OFA family MFS transporter -
  NSQ79_RS02245 (NSQ79_02245) - 430945..431652 (+) 708 WP_014633986.1 O-methyltransferase -
  NSQ79_RS02250 (NSQ79_02250) - 431714..432856 (+) 1143 WP_002886735.1 peptidyl-prolyl cis-trans isomerase -

Sequence


Protein


Download         Length: 601 a.a.        Molecular weight: 69068.13 Da        Isoelectric Point: 4.5615

>NTDB_id=966087 NSQ79_RS02235 WP_014633523.1 427635..429440(+) (pepF) [Streptococcus sp. FSL W7-1342]
MSDNRAHLEEKYTWDLTTIFATDADWETEYESTVQDLKKASAYAGHLLDSAKNLLEATELYMSLMRRLEKIYVYASMKND
QDTTVGLYQEYQAKASNLYSQLSEAFAYFEPEFMALDDKKLAEFKEQEPGLGLYDHYFERLLANKDHVLSQEAEELLAAA
GDIFNGPTDTFNVLDNADILFPWVSDGQGDVVELTHGNFITLMESKDRDIRKGAYEAMYGTYEQFQHTYAQTLQGVVKVH
NYQAKVRHYNSARHAALAANFIPESVYDSLLESVNKHLPLLHRYLDLRKKVLGLDELKMYDVYTPLSETETALTYEESLK
KAEEVLAIFGEEYSKGVHAAFTERWIDVHPNKGKRSGAYSGGAYDTNAFMLLNWQDTLDNLFTLVHETGHSLHSTFTRQT
QPYVYGDYPIFLAEIASTTNENILTETLLKEVKDDKTRFAILNHYLDGFKGTVFRQTQFAEFEHAIHEADASGQILTADF
MNKLYADLNEKYYNLKAEDNYEIQFEWERIPHFYMNYYVYQYATGFAAASYLAEKIVHGTEEDKEAYLTYLKAGSSDYPL
EVIKKAGVDMTNTDYLDAAFKVFEDRLVELEVLVEKGVHLS

Nucleotide


Download         Length: 1806 bp        

>NTDB_id=966087 NSQ79_RS02235 WP_014633523.1 427635..429440(+) (pepF) [Streptococcus sp. FSL W7-1342]
ATGTCAGACAATCGTGCTCATTTAGAAGAGAAATACACATGGGATTTGACGACCATTTTTGCGACAGATGCAGATTGGGA
GACTGAATATGAAAGCACTGTTCAGGATTTGAAGAAGGCTAGTGCTTATGCAGGTCATCTCTTAGATTCTGCTAAGAACT
TGCTTGAGGCAACAGAACTTTATATGAGCCTTATGCGTCGCTTGGAGAAAATCTATGTGTATGCGTCAATGAAAAATGAC
CAAGACACAACAGTAGGGCTTTACCAAGAGTATCAAGCTAAGGCCTCAAACCTTTACTCACAGTTGAGTGAAGCCTTTGC
TTACTTTGAGCCTGAATTTATGGCCTTGGATGATAAGAAATTAGCTGAATTTAAAGAACAAGAGCCAGGTCTTGGACTTT
ATGACCACTATTTCGAACGCCTTTTGGCAAACAAGGACCATGTTCTTTCTCAAGAAGCTGAGGAGCTCTTGGCAGCAGCT
GGTGATATTTTCAACGGTCCAACGGATACCTTCAATGTCTTAGATAATGCTGATATCCTCTTCCCATGGGTATCAGATGG
TCAAGGGGATGTGGTTGAGTTGACGCATGGTAACTTTATCACTCTCATGGAATCTAAGGACCGTGACATTCGTAAGGGAG
CTTATGAAGCGATGTATGGGACTTATGAGCAGTTCCAACATACTTATGCACAAACACTCCAAGGCGTTGTCAAGGTTCAC
AATTACCAAGCCAAAGTTCGTCACTATAATTCAGCACGTCATGCAGCACTTGCGGCTAACTTTATTCCAGAGAGTGTTTA
TGACTCACTCTTGGAATCAGTGAACAAGCATTTGCCACTTTTACACCGTTACCTAGATTTGCGTAAGAAGGTCTTGGGAC
TTGATGAGCTTAAGATGTATGACGTCTATACACCACTTTCTGAGACTGAAACTGCTCTTACTTATGAAGAATCTCTCAAG
AAAGCAGAAGAAGTCTTGGCAATCTTTGGTGAAGAGTATAGTAAAGGGGTCCATGCAGCCTTTACGGAACGTTGGATTGA
CGTTCACCCTAACAAAGGAAAACGTTCAGGGGCTTACTCAGGTGGTGCCTACGATACCAATGCCTTCATGCTTTTGAACT
GGCAAGACACTTTGGACAATCTCTTTACCTTGGTTCACGAAACTGGCCATAGTTTGCATTCAACGTTCACACGTCAGACT
CAACCATATGTTTACGGAGATTACCCAATCTTCTTGGCAGAAATTGCGTCTACAACCAATGAAAATATCTTGACAGAAAC
GCTTCTTAAAGAGGTTAAAGATGACAAGACACGTTTTGCTATTCTTAACCACTATTTGGATGGCTTCAAGGGAACTGTCT
TCCGTCAAACCCAATTTGCTGAGTTTGAACATGCTATCCATGAGGCAGATGCATCTGGTCAAATCTTGACAGCGGACTTC
ATGAATAAGCTTTACGCAGACCTCAATGAGAAATACTATAACCTTAAAGCTGAGGATAACTACGAAATTCAGTTTGAGTG
GGAACGTATTCCGCATTTCTACATGAATTACTATGTCTACCAATACGCTACAGGATTTGCTGCGGCAAGCTACTTGGCTG
AAAAAATTGTTCACGGTACTGAAGAAGATAAAGAAGCTTACCTTACTTACCTTAAGGCGGGAAGCTCAGACTATCCTTTG
GAAGTCATCAAGAAAGCTGGTGTTGATATGACCAATACCGACTACTTAGATGCTGCCTTCAAAGTTTTTGAAGACCGTCT
CGTTGAATTGGAAGTCTTGGTTGAAAAAGGTGTTCACCTTTCGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

99.501

100

0.995


Multiple sequence alignment