Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   AABJ90_RS05755 Genome accession   NZ_AP028964
Coordinates   1120698..1121393 (+) Length   231 a.a.
NCBI ID   WP_033884849.1    Uniprot ID   -
Organism   Bacillus subtilis strain NA05 = NBRC 116153     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1115698..1126393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABJ90_RS05730 (BsubNA05_11000) ytrB 1115725..1116603 (+) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -
  AABJ90_RS05735 (BsubNA05_11010) ytrC 1116597..1117583 (+) 987 WP_003246175.1 ABC transporter permease YtrC -
  AABJ90_RS05740 (BsubNA05_11020) ytrD 1117613..1118590 (+) 978 WP_131227868.1 ABC transporter permease YtrD -
  AABJ90_RS05745 (BsubNA05_11030) ytrE 1118605..1119300 (+) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  AABJ90_RS05750 (BsubNA05_11040) ytrF 1119290..1120600 (+) 1311 WP_338382536.1 ABC transporter permease YtrF -
  AABJ90_RS05755 (BsubNA05_11050) braR 1120698..1121393 (+) 696 WP_033884849.1 two-component response regulator BceR Regulator
  AABJ90_RS05760 (BsubNA05_11060) bceS 1121386..1122390 (+) 1005 WP_338382537.1 two-component sensor histidine kinase BceS -
  AABJ90_RS05765 (BsubNA05_11070) bceA 1122492..1123253 (+) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  AABJ90_RS05770 (BsubNA05_11080) bceB 1123243..1125183 (+) 1941 WP_338382538.1 bacitracin ABC transporter permease BceB -
  AABJ90_RS05775 (BsubNA05_11090) yttA 1125220..1125966 (-) 747 WP_048655239.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26893.77 Da        Isoelectric Point: 5.3731

>NTDB_id=96593 AABJ90_RS05755 WP_033884849.1 1120698..1121393(+) (braR) [Bacillus subtilis strain NA05 = NBRC 116153]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=96593 AABJ90_RS05755 WP_033884849.1 1120698..1121393(+) (braR) [Bacillus subtilis strain NA05 = NBRC 116153]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGTTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377