Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NSQ10_RS11530 | Genome accession | NZ_CP150196 |
| Coordinates | 2258869..2259204 (+) | Length | 111 a.a. |
| NCBI ID | WP_024422969.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R5-0432 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2253869..2264204
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ10_RS11510 (NSQ10_11510) | gcvT | 2254357..2255454 (-) | 1098 | WP_039179920.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NSQ10_RS11515 (NSQ10_11515) | - | 2256006..2257676 (+) | 1671 | WP_039179923.1 | SNF2-related protein | - |
| NSQ10_RS11520 (NSQ10_11520) | - | 2257691..2258488 (+) | 798 | WP_039179926.1 | YqhG family protein | - |
| NSQ10_RS11525 (NSQ10_11525) | - | 2258671..2258835 (+) | 165 | WP_073206269.1 | anti-repressor SinI family protein | - |
| NSQ10_RS11530 (NSQ10_11530) | sinR | 2258869..2259204 (+) | 336 | WP_024422969.1 | transcriptional regulator SinR | Regulator |
| NSQ10_RS11535 (NSQ10_11535) | - | 2259272..2260072 (-) | 801 | WP_039179929.1 | TasA family protein | - |
| NSQ10_RS11540 (NSQ10_11540) | - | 2260130..2260702 (-) | 573 | WP_039183199.1 | signal peptidase I | - |
| NSQ10_RS11545 (NSQ10_11545) | tapA | 2260754..2261281 (-) | 528 | WP_059374880.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSQ10_RS11550 (NSQ10_11550) | - | 2261581..2261859 (+) | 279 | WP_231120214.1 | DUF3889 domain-containing protein | - |
| NSQ10_RS11555 (NSQ10_11555) | - | 2261893..2262087 (-) | 195 | WP_024718846.1 | YqzE family protein | - |
| NSQ10_RS11560 (NSQ10_11560) | comGG | 2262147..2262530 (-) | 384 | WP_039179939.1 | competence type IV pilus minor pilin ComGG | - |
| NSQ10_RS11565 (NSQ10_11565) | comGF | 2262527..2263057 (-) | 531 | WP_339207882.1 | competence type IV pilus minor pilin ComGF | - |
| NSQ10_RS11570 (NSQ10_11570) | comGE | 2262966..2263283 (-) | 318 | WP_039179945.1 | competence type IV pilus minor pilin ComGE | - |
| NSQ10_RS11575 (NSQ10_11575) | comGD | 2263267..2263713 (-) | 447 | WP_039179947.1 | competence type IV pilus minor pilin ComGD | - |
| NSQ10_RS11580 (NSQ10_11580) | comGC | 2263706..2263999 (-) | 294 | WP_024422977.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12978.56 Da Isoelectric Point: 5.0026
>NTDB_id=965920 NSQ10_RS11530 WP_024422969.1 2258869..2259204(+) (sinR) [Bacillus sp. FSL R5-0432]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=965920 NSQ10_RS11530 WP_024422969.1 2258869..2259204(+) (sinR) [Bacillus sp. FSL R5-0432]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTTTTAAACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |