Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSQ10_RS07150 Genome accession   NZ_CP150196
Coordinates   1407810..1408382 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0432     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1402810..1413382
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ10_RS07120 (NSQ10_07120) dapD 1402937..1403647 (+) 711 WP_039178160.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSQ10_RS07125 (NSQ10_07125) - 1403729..1404859 (+) 1131 WP_039178162.1 N-acetyldiaminopimelate deacetylase -
  NSQ10_RS07130 (NSQ10_07130) - 1404910..1405152 (+) 243 WP_024424725.1 YkuS family protein -
  NSQ10_RS07135 (NSQ10_07135) - 1405175..1405984 (-) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  NSQ10_RS07140 (NSQ10_07140) ahpA 1406256..1406798 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  NSQ10_RS07145 (NSQ10_07145) - 1406881..1407339 (+) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  NSQ10_RS07150 (NSQ10_07150) rok 1407810..1408382 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  NSQ10_RS07155 (NSQ10_07155) - 1408430..1409347 (-) 918 WP_039178167.1 hypothetical protein -
  NSQ10_RS07160 (NSQ10_07160) - 1409432..1410013 (+) 582 WP_039178170.1 molybdenum cofactor guanylyltransferase -
  NSQ10_RS07165 (NSQ10_07165) - 1410045..1411061 (+) 1017 WP_039178172.1 thiazole biosynthesis adenylyltransferase ThiF -
  NSQ10_RS07170 (NSQ10_07170) glp 1411071..1412348 (+) 1278 WP_339209401.1 gephyrin-like molybdotransferase Glp -
  NSQ10_RS07175 (NSQ10_07175) mobB 1412330..1412854 (+) 525 WP_039183079.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NSQ10_RS07180 (NSQ10_07180) - 1412851..1413342 (+) 492 WP_039178177.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=965910 NSQ10_RS07150 WP_024426871.1 1407810..1408382(+) (rok) [Bacillus sp. FSL R5-0432]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=965910 NSQ10_RS07150 WP_024426871.1 1407810..1408382(+) (rok) [Bacillus sp. FSL R5-0432]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGCGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAAAGAAAGACAGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCAAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAACGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTATCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment