Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NSQ10_RS07025 Genome accession   NZ_CP150196
Coordinates   1388013..1388474 (-) Length   153 a.a.
NCBI ID   WP_327841964.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0432     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1383013..1393474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ10_RS07000 (NSQ10_07000) - 1383618..1384502 (+) 885 WP_106025229.1 cation diffusion facilitator family transporter -
  NSQ10_RS07005 (NSQ10_07005) - 1384567..1384719 (-) 153 WP_185847125.1 hypothetical protein -
  NSQ10_RS07010 (NSQ10_07010) - 1385021..1385560 (+) 540 WP_039178127.1 RDD family protein -
  NSQ10_RS07015 (NSQ10_07015) - 1385684..1386994 (+) 1311 WP_039178128.1 MFS transporter -
  NSQ10_RS07020 (NSQ10_07020) - 1387068..1387976 (+) 909 WP_024424709.1 chemotaxis protein -
  NSQ10_RS07025 (NSQ10_07025) kre 1388013..1388474 (-) 462 WP_327841964.1 YkyB family protein Regulator
  NSQ10_RS07030 (NSQ10_07030) - 1388710..1388886 (+) 177 WP_180272404.1 hypothetical protein -
  NSQ10_RS07035 (NSQ10_07035) - 1388979..1389896 (-) 918 WP_064498384.1 AraC family transcriptional regulator -
  NSQ10_RS07040 (NSQ10_07040) - 1390010..1390906 (+) 897 WP_339209389.1 EamA family transporter -
  NSQ10_RS07045 (NSQ10_07045) - 1391088..1391303 (-) 216 WP_039178134.1 hypothetical protein -
  NSQ10_RS07050 (NSQ10_07050) - 1391500..1392777 (-) 1278 WP_039178137.1 MFS transporter -
  NSQ10_RS07055 (NSQ10_07055) - 1392851..1393348 (-) 498 WP_058837781.1 L,D-transpeptidase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17741.33 Da        Isoelectric Point: 10.2452

>NTDB_id=965909 NSQ10_RS07025 WP_327841964.1 1388013..1388474(-) (kre) [Bacillus sp. FSL R5-0432]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPTATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=965909 NSQ10_RS07025 WP_327841964.1 1388013..1388474(-) (kre) [Bacillus sp. FSL R5-0432]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGCGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACGAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
CCCGAAAGCGAATATGTCATTAAACCGAGCAAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTACCGCCA
CAAAACAAAAATCACATTACACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765

Multiple sequence alignment