Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NST56_RS08220 Genome accession   NZ_CP150195
Coordinates   1581865..1582449 (+) Length   194 a.a.
NCBI ID   WP_010334068.1    Uniprot ID   A0AAP3CRU9
Organism   Bacillus sp. FSL R5-0560     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1576865..1587449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST56_RS08190 (NST56_08190) dapD 1577039..1577749 (+) 711 WP_168747648.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NST56_RS08195 (NST56_08195) - 1577820..1578944 (+) 1125 WP_268450396.1 N-acetyldiaminopimelate deacetylase -
  NST56_RS08200 (NST56_08200) - 1579005..1579250 (+) 246 WP_010334064.1 YkuS family protein -
  NST56_RS08205 (NST56_08205) - 1579285..1580088 (-) 804 WP_268505551.1 mechanosensitive ion channel family protein -
  NST56_RS08210 (NST56_08210) ahpA 1580333..1580875 (+) 543 WP_268446327.1 biofilm-specific peroxidase AhpA -
  NST56_RS08215 (NST56_08215) ykuV 1580956..1581414 (+) 459 WP_010334067.1 thiol-disulfide oxidoreductase YkuV -
  NST56_RS08220 (NST56_08220) rok 1581865..1582449 (+) 585 WP_010334068.1 transcriptional regulator Rok Regulator
  NST56_RS08225 (NST56_08225) - 1582492..1583457 (-) 966 WP_339181265.1 sporulation protein -
  NST56_RS08230 (NST56_08230) - 1583590..1584189 (+) 600 WP_268505555.1 molybdenum cofactor guanylyltransferase -
  NST56_RS08235 (NST56_08235) - 1584241..1585260 (+) 1020 WP_268505557.1 MoeB/ThiF family adenylyltransferase -
  NST56_RS08240 (NST56_08240) glp 1585278..1586570 (+) 1293 WP_268505562.1 gephyrin-like molybdotransferase Glp -
  NST56_RS08245 (NST56_08245) mobB 1586531..1587052 (+) 522 WP_339181270.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22131.11 Da        Isoelectric Point: 9.7169

>NTDB_id=965838 NST56_RS08220 WP_010334068.1 1581865..1582449(+) (rok) [Bacillus sp. FSL R5-0560]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSETKKEFRSERKTDSLPVLAELAAQEIRSYQPPS
QQQSAQPQLQTISSLPAGIPDGATRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESVESTESATE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=965838 NST56_RS08220 WP_010334068.1 1581865..1582449(+) (rok) [Bacillus sp. FSL R5-0560]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAACGAAAAAAGAGTTCC
GTTCTGAAAGAAAAACCGACTCTCTGCCAGTTCTCGCCGAGCTTGCAGCTCAGGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCCGCCCAACCTCAGCTTCAAACTATTTCCTCTCTTCCTGCCGGTATACCAGATGGAGCGACAAGAAGAAG
AAGAGGAACGGCAAGACCGGGGTCAAAAGCAGCTAAACTGCGTGAAGCGGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAAAGTTCCGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTGGAAATTCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTATCCTGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAGGGCGAAATCGAATCCGTTGA
ATCAACTGAATCAGCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

94.709

97.423

0.923

Multiple sequence alignment