Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   NST56_RS06365 Genome accession   NZ_CP150195
Coordinates   1269344..1270495 (+) Length   383 a.a.
NCBI ID   WP_339180766.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0560     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1264344..1275495
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST56_RS06335 (NST56_06335) - 1265016..1266233 (+) 1218 WP_339182103.1 MFS transporter -
  NST56_RS06340 (NST56_06340) - 1266399..1266977 (+) 579 WP_010333747.1 GNAT family N-acetyltransferase -
  NST56_RS06345 (NST56_06345) spx 1267156..1267551 (+) 396 WP_010333748.1 transcriptional regulator Spx -
  NST56_RS06350 (NST56_06350) - 1267594..1268250 (-) 657 WP_168747421.1 TerC family protein -
  NST56_RS06355 (NST56_06355) - 1268438..1268563 (+) 126 WP_120698858.1 hypothetical protein -
  NST56_RS06360 (NST56_06360) mecA 1268530..1269186 (+) 657 WP_229147846.1 adaptor protein MecA Regulator
  NST56_RS06365 (NST56_06365) coiA 1269344..1270495 (+) 1152 WP_339180766.1 competence protein CoiA family protein Machinery gene
  NST56_RS06370 (NST56_06370) pepF 1270725..1272554 (+) 1830 WP_010333752.1 oligoendopeptidase F -
  NST56_RS06375 (NST56_06375) - 1272592..1272759 (-) 168 WP_010333753.1 hypothetical protein -
  NST56_RS06380 (NST56_06380) spxH 1273073..1273972 (-) 900 WP_010333755.1 protease adaptor protein SpxH -
  NST56_RS06385 (NST56_06385) - 1273969..1274367 (-) 399 WP_010333756.1 thiol management oxidoreductase -
  NST56_RS06390 (NST56_06390) - 1274634..1275365 (-) 732 WP_268449912.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44661.66 Da        Isoelectric Point: 9.9560

>NTDB_id=965833 NST56_RS06365 WP_339180766.1 1269344..1270495(+) (coiA) [Bacillus sp. FSL R5-0560]
MFSAVTEDGQVFHLIGRQSREKLKQTRFFCPVCAEELDVKLGSQKAPHFAHKQNKSCTIDIEPESAYHLEGKRQLYVWLK
TQKASPLLEPYVREIKQRPDILAKVKGNTLAVEYQCATLPPDVFQKRTAGFKQAGMIPRWILGGNRLKRTSSSFYQLSAF
HWQFINTSQNSDLLCYCPKTHSFLRLSHIIPFYTTHFYCSVQTIPVRQAAAEDLFFTESDSSFKHTDWTGAILRFRRKTH
RFLSKDINRLRLLFYEKRQTPLSFLPTEVFVPVQKGAVFKSPVFVWQGYLYLFITDLGYKHAPIRFSAILQHCKLHIHKK
NILLRGEYSDQGLSEAVKQYIEFLCKKGFLRETQKEVYVLNQPAKRSQSLQDLIEKDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=965833 NST56_RS06365 WP_339180766.1 1269344..1270495(+) (coiA) [Bacillus sp. FSL R5-0560]
TTGTTTAGTGCTGTGACAGAAGACGGTCAAGTTTTTCACCTCATAGGCAGGCAGAGCAGAGAAAAATTAAAGCAGACCAG
GTTTTTTTGCCCGGTGTGTGCAGAGGAGCTCGATGTGAAGCTAGGGTCTCAGAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCACGATAGACATAGAACCTGAGAGCGCCTATCACTTAGAAGGAAAACGGCAGCTATATGTATGGCTGAAA
ACGCAAAAGGCTTCACCGCTCTTAGAGCCGTATGTCCGAGAGATTAAACAAAGGCCCGACATCTTGGCGAAAGTTAAGGG
GAATACGCTTGCTGTTGAATACCAATGCGCGACTCTCCCTCCTGATGTCTTTCAAAAAAGAACAGCCGGTTTCAAACAAG
CAGGAATGATACCGCGGTGGATTCTTGGGGGCAACCGCTTAAAACGGACATCTTCATCCTTTTACCAGCTGTCCGCTTTC
CATTGGCAGTTTATCAATACCAGTCAGAACAGCGATCTGTTATGTTACTGCCCCAAAACACATTCTTTCCTGAGGCTCAG
CCACATCATCCCGTTTTACACAACCCATTTTTACTGCTCCGTCCAAACGATTCCAGTCCGTCAGGCAGCGGCAGAAGATC
TCTTTTTCACTGAATCGGATTCATCGTTTAAGCACACAGATTGGACAGGAGCCATTCTCCGTTTTCGCCGCAAAACTCAT
CGGTTTCTCTCTAAAGATATAAATCGGCTTAGGCTTTTGTTTTATGAAAAACGGCAAACGCCTCTCTCTTTTCTTCCGAC
AGAGGTGTTTGTTCCTGTACAGAAAGGAGCCGTTTTCAAGAGTCCCGTTTTTGTATGGCAGGGTTATCTTTATCTGTTTA
TTACGGATCTTGGGTATAAACATGCGCCCATTCGCTTTTCAGCCATTTTGCAGCACTGCAAACTACACATTCATAAAAAG
AACATTCTACTCAGAGGAGAATACAGCGATCAGGGTCTCAGTGAGGCTGTTAAACAGTACATTGAATTTTTGTGCAAGAA
GGGATTTTTAAGAGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCCGCAAAGCGCAGCCAATCATTACAGGATCTCA
TTGAAAAAGACAGAAGCTGTTTTATCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

75.871

97.389

0.739


Multiple sequence alignment