Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NST56_RS06250 Genome accession   NZ_CP150195
Coordinates   1247058..1247249 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus sp. FSL R5-0560     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1242058..1252249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST56_RS06220 (NST56_06220) argF 1242887..1243843 (+) 957 WP_339180745.1 ornithine carbamoyltransferase -
  NST56_RS06225 (NST56_06225) - 1243945..1244124 (+) 180 WP_010333726.1 YjzC family protein -
  NST56_RS06230 (NST56_06230) - 1244170..1244355 (-) 186 WP_010333727.1 YjzD family protein -
  NST56_RS06235 (NST56_06235) - 1244614..1245351 (+) 738 WP_168747414.1 hypothetical protein -
  NST56_RS06240 (NST56_06240) - 1245435..1245998 (+) 564 WP_168747415.1 hypothetical protein -
  NST56_RS06245 (NST56_06245) med 1246090..1247043 (+) 954 WP_339180750.1 BMP family ABC transporter substrate-binding protein Regulator
  NST56_RS06250 (NST56_06250) comZ 1247058..1247249 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NST56_RS06255 (NST56_06255) - 1247279..1247509 (-) 231 WP_081638273.1 hypothetical protein -
  NST56_RS06260 (NST56_06260) fabH 1247675..1248613 (+) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  NST56_RS06265 (NST56_06265) fabF 1248636..1249874 (+) 1239 WP_106022352.1 beta-ketoacyl-ACP synthase II -
  NST56_RS06270 (NST56_06270) - 1249954..1250739 (+) 786 WP_268446763.1 DUF2268 domain-containing protein -
  NST56_RS06275 (NST56_06275) appD 1250930..1251916 (+) 987 WP_010333735.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=965829 NST56_RS06250 WP_003224559.1 1247058..1247249(+) (comZ) [Bacillus sp. FSL R5-0560]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=965829 NST56_RS06250 WP_003224559.1 1247058..1247249(+) (comZ) [Bacillus sp. FSL R5-0560]
ATGCAGCACGAAAAATCACTTGAGTTTTTGCAAATTGCAATGAAATATCTGCCTGAAGCGAAAGAGCAGCTAGAAAAATC
GGGAATAGAACTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGGCGGAAGCCTACGAGCTAG
GTAAATCCGACGCAAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment