Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   NST56_RS04590 Genome accession   NZ_CP150195
Coordinates   943157..943948 (+) Length   263 a.a.
NCBI ID   WP_010333449.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0560     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 938157..948948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST56_RS04560 (NST56_04560) - 939002..940033 (+) 1032 WP_326218860.1 iron ABC transporter permease -
  NST56_RS04565 (NST56_04565) - 940147..941025 (+) 879 WP_339180357.1 PhzF family phenazine biosynthesis isomerase -
  NST56_RS04570 (NST56_04570) - 941113..941697 (+) 585 WP_024120644.1 nitroreductase -
  NST56_RS04575 (NST56_04575) - 941736..941927 (-) 192 WP_229148989.1 YfhD family protein -
  NST56_RS04580 (NST56_04580) - 941993..942103 (-) 111 WP_010333447.1 YfhE family protein -
  NST56_RS04585 (NST56_04585) - 942157..943068 (-) 912 WP_339180362.1 TIGR01777 family oxidoreductase -
  NST56_RS04590 (NST56_04590) recX 943157..943948 (+) 792 WP_010333449.1 recombination regulator RecX Regulator
  NST56_RS04595 (NST56_04595) - 943956..944276 (+) 321 WP_010333450.1 YfhH family protein -
  NST56_RS04600 (NST56_04600) - 944414..945607 (+) 1194 WP_268447382.1 MFS transporter -
  NST56_RS04605 (NST56_04605) - 945641..945793 (-) 153 WP_010333452.1 small, acid-soluble spore protein K -
  NST56_RS04610 (NST56_04610) - 945918..946187 (+) 270 WP_024120650.1 YfhJ family protein -
  NST56_RS04615 (NST56_04615) - 946224..946607 (-) 384 WP_339180367.1 hypothetical protein -
  NST56_RS04620 (NST56_04620) - 946609..946821 (-) 213 WP_339180370.1 helix-turn-helix transcriptional regulator -
  NST56_RS04625 (NST56_04625) - 947012..947530 (+) 519 WP_010333456.1 SH3 domain-containing protein -
  NST56_RS04630 (NST56_04630) - 947616..947948 (+) 333 WP_339180374.1 SdpI family protein -
  NST56_RS04635 (NST56_04635) - 947935..948798 (+) 864 WP_010333458.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 263 a.a.        Molecular weight: 30814.02 Da        Isoelectric Point: 6.1867

>NTDB_id=965820 NST56_RS04590 WP_010333449.1 943157..943948(+) (recX) [Bacillus sp. FSL R5-0560]
MPFITKISAQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLEIIEIQYGDEVKKGFNRAIEFLSYRMRSTKEV
EDYLKKKETSAPVIAEVIHRLNDYSYLNDQEFAAAYVSTHKKTNGKGPDVLFRELKAKGIDDDTIKDTLGSFSFEEQTEK
AVTHIEKLLKKDKKLSSKEIKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLREEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=965820 NST56_RS04590 WP_010333449.1 943157..943948(+) (recX) [Bacillus sp. FSL R5-0560]
ATGCCATTTATTACAAAGATATCAGCGCAAAAGAAGAATACTGAACGTTTTAATATTTTTCTGGATGAAAAATATGCTTT
CAGCGTTGACGCCGATGTGCTCGTGAAATTTGAGCTTAAAAAGGGAAAAGAGCTTGATGACCTCGAGATCATTGAGATTC
AATACGGCGATGAAGTGAAAAAAGGCTTCAACCGTGCGATTGAGTTTTTATCCTATCGAATGAGGTCAACGAAAGAGGTA
GAAGACTACTTAAAGAAAAAAGAAACCTCGGCGCCCGTCATTGCGGAAGTGATTCATAGGCTGAACGATTACAGCTATTT
AAATGACCAAGAGTTTGCGGCGGCCTATGTAAGCACTCACAAAAAAACAAACGGAAAAGGGCCTGACGTTTTGTTCAGAG
AGCTGAAGGCGAAAGGAATCGATGACGATACGATTAAAGATACGCTAGGTTCTTTCTCGTTTGAGGAACAGACGGAAAAA
GCAGTTACGCATATCGAAAAGCTTCTGAAGAAAGACAAGAAACTCTCTTCAAAAGAAATCAAACAGCGAGCCCAGATGCA
GCTGCAGCGCAAAGGCTTTTCATTTGATGTCATCTCTGCGGCGCTGGAGCAGATTGAATACGAAAATGATGAAGACACTG
AAAAAGAAGCGCTGCGTCTTCATGCGGAAAAAGCGTTTAGAAAATACCGTTATGACGGCTCCTATGAAAGTGCCATGAAG
GTCAAACAATTTTTATTTAGAAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCGGGAAGAGGAGTAG

Domains


Predicted by InterproScan.

(84-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

90.875

100

0.909


Multiple sequence alignment