Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   NST56_RS02025 Genome accession   NZ_CP150195
Coordinates   388463..388603 (+) Length   46 a.a.
NCBI ID   WP_229150297.1    Uniprot ID   A0AAP3CQM3
Organism   Bacillus sp. FSL R5-0560     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 383463..393603
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST56_RS02020 (NST56_02020) srfAB 385327..388419 (+) 3093 Protein_354 surfactin non-ribosomal peptide synthetase SrfAB -
  NST56_RS02025 (NST56_02025) comS 388463..388603 (+) 141 WP_229150297.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5218.01 Da        Isoelectric Point: 9.2422

>NTDB_id=965815 NST56_RS02025 WP_229150297.1 388463..388603(+) (comS) [Bacillus sp. FSL R5-0560]
MNRSGKHLISSIILYPRPSGECTSSISLDKQAQATTSLLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=965815 NST56_RS02025 WP_229150297.1 388463..388603(+) (comS) [Bacillus sp. FSL R5-0560]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTACATCCTCAATCAG
CTTGGACAAGCAAGCACAAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGAGAAGTAA

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

93.478

100

0.935

Multiple sequence alignment