Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NST29_RS10620 Genome accession   NZ_CP150194
Coordinates   2114514..2115461 (-) Length   315 a.a.
NCBI ID   WP_033022688.1    Uniprot ID   A0A150N3A8
Organism   Geobacillus sp. FSL W8-0026     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2109514..2120461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST29_RS10595 (NST29_10595) - 2109563..2110996 (-) 1434 WP_033022678.1 site-specific DNA-methyltransferase -
  NST29_RS10600 (NST29_10600) - 2111546..2112511 (-) 966 WP_033022679.1 siderophore ABC transporter substrate-binding protein -
  NST29_RS10605 (NST29_10605) - 2112508..2112819 (-) 312 WP_033022681.1 hypothetical protein -
  NST29_RS10610 (NST29_10610) - 2112822..2113577 (-) 756 WP_033022683.1 ABC transporter ATP-binding protein -
  NST29_RS10615 (NST29_10615) - 2113571..2114521 (-) 951 WP_033022685.1 iron chelate uptake ABC transporter family permease subunit -
  NST29_RS10620 (NST29_10620) ceuB 2114514..2115461 (-) 948 WP_033022688.1 ABC transporter permease Machinery gene
  NST29_RS10625 (NST29_10625) gucD 2115887..2117353 (-) 1467 WP_033022690.1 alpha-ketoglutaric semialdehyde dehydrogenase GucD -
  NST29_RS10630 (NST29_10630) cysI 2117880..2119601 (-) 1722 WP_033022692.1 assimilatory sulfite reductase (NADPH) hemoprotein subunit -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34432.40 Da        Isoelectric Point: 9.4682

>NTDB_id=965782 NST29_RS10620 WP_033022688.1 2114514..2115461(-) (ceuB) [Geobacillus sp. FSL W8-0026]
MKKWILLLVVLSMGSLFVGVHDLSPSALLSGDQAAWEIFLISRLPRLISILLAGSSVSICGLIMQQLSQNKFVSPTTAGT
MDWARLGLLVSMILFASAAPLVKAAIAVVFAFVGTLLFMTMLDRIKYKDSVFIPLVGLMFGNIIGSVTMFLAYRYDLIQS
LSAWLHGDFSVMMEGRYETLYVSVPLMGLAYAYANRFTIAGMGEEMATNLGLRYRSVVYAGLLIVAVVSAIEVLTVGTLP
FLGLVVPNLVTMYYGDHLRKVLPLTAVFGALFVLLCDVLGRVVIYPYEIPIGLTVGVIGSGIFLYLLARRTKRYV

Nucleotide


Download         Length: 948 bp        

>NTDB_id=965782 NST29_RS10620 WP_033022688.1 2114514..2115461(-) (ceuB) [Geobacillus sp. FSL W8-0026]
ATGAAAAAGTGGATATTGTTGCTTGTTGTCCTATCCATGGGTTCGCTGTTTGTCGGCGTTCATGATTTATCGCCCAGCGC
GCTGCTTTCCGGTGACCAGGCGGCTTGGGAAATTTTCTTGATTAGCCGCTTGCCTCGGCTGATCAGCATTCTTCTTGCCG
GGTCAAGCGTCAGCATTTGCGGCTTGATTATGCAGCAGTTGAGCCAAAACAAATTCGTGTCGCCGACAACCGCGGGAACG
ATGGATTGGGCGCGGCTCGGCTTGCTGGTGTCCATGATTTTGTTCGCTTCGGCGGCTCCGCTGGTCAAAGCCGCTATAGC
TGTTGTGTTTGCGTTTGTCGGAACGCTGCTGTTCATGACGATGTTAGATCGCATCAAATATAAAGATTCCGTGTTCATAC
CGCTTGTCGGTTTGATGTTCGGCAACATCATCGGTTCAGTGACGATGTTTTTGGCCTATAGGTACGATTTGATTCAATCG
CTTTCCGCTTGGCTGCACGGCGACTTTTCCGTGATGATGGAGGGGCGCTACGAGACGTTGTATGTAAGCGTCCCGCTGAT
GGGTCTTGCCTATGCATACGCCAATCGTTTTACGATCGCGGGAATGGGAGAGGAGATGGCAACGAATTTAGGGCTTCGCT
ATCGATCGGTTGTGTATGCGGGGCTGCTCATTGTCGCGGTCGTTTCAGCGATTGAAGTGCTGACGGTGGGGACGCTGCCG
TTTTTGGGCTTGGTCGTTCCGAATCTTGTAACGATGTATTACGGTGATCATTTGCGCAAAGTGTTGCCGCTGACAGCGGT
GTTTGGCGCGCTGTTTGTGTTGCTTTGTGATGTATTGGGGCGCGTGGTCATCTATCCGTATGAAATTCCGATTGGGTTGA
CGGTCGGGGTGATAGGGAGCGGCATTTTTCTATATTTGCTGGCAAGGAGAACAAAGCGGTATGTCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(7-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A150N3A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.637

99.683

0.505

Multiple sequence alignment