Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NST90_RS19680 Genome accession   NZ_CP150193
Coordinates   3862303..3863097 (-) Length   264 a.a.
NCBI ID   WP_283748087.1    Uniprot ID   -
Organism   Bacillus sp. FSL E2-8900     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3857303..3868097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST90_RS19655 (NST90_19655) - 3857827..3859899 (-) 2073 WP_033666632.1 sigma-54-dependent Fis family transcriptional regulator -
  NST90_RS19660 (NST90_19660) - 3860037..3860270 (+) 234 WP_001190211.1 DUF2627 domain-containing protein -
  NST90_RS19665 (NST90_19665) - 3860320..3861048 (-) 729 WP_000172583.1 glycerophosphodiester phosphodiesterase -
  NST90_RS19670 (NST90_19670) - 3861099..3861245 (+) 147 WP_001247671.1 YycC family protein -
  NST90_RS19675 (NST90_19675) - 3861487..3862050 (-) 564 WP_000428229.1 PRK06770 family protein -
  NST90_RS19680 (NST90_19680) spo0A 3862303..3863097 (-) 795 WP_283748087.1 sporulation transcription factor Spo0A Regulator
  NST90_RS19685 (NST90_19685) spoIVB 3863388..3864686 (-) 1299 WP_002024767.1 SpoIVB peptidase -
  NST90_RS19690 (NST90_19690) recN 3864805..3866544 (-) 1740 WP_000947767.1 DNA repair protein RecN Machinery gene
  NST90_RS19695 (NST90_19695) argR 3866809..3867258 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29405.14 Da        Isoelectric Point: 7.1175

>NTDB_id=965744 NST90_RS19680 WP_283748087.1 3862303..3863097(-) (spo0A) [Bacillus sp. FSL E2-8900]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKSTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=965744 NST90_RS19680 WP_283748087.1 3862303..3863097(-) (spo0A) [Bacillus sp. FSL E2-8900]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTCGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACGCTATGATTAAGCGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAATGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACCACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAATCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814

Multiple sequence alignment