Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSQ18_RS08640 Genome accession   NZ_CP150191
Coordinates   1759279..1760232 (+) Length   317 a.a.
NCBI ID   WP_016838353.1    Uniprot ID   A0A840PUI1
Organism   Ureibacillus sp. FSL K6-0786     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1754279..1765232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ18_RS08630 (NSQ18_08630) hflX 1755821..1757104 (+) 1284 WP_016838355.1 GTPase HflX -
  NSQ18_RS08635 (NSQ18_08635) - 1757450..1758937 (+) 1488 WP_016838354.1 peptide MFS transporter -
  NSQ18_RS08640 (NSQ18_08640) ceuB 1759279..1760232 (+) 954 WP_016838353.1 ABC transporter permease Machinery gene
  NSQ18_RS08645 (NSQ18_08645) - 1760222..1761178 (+) 957 WP_016838352.1 iron chelate uptake ABC transporter family permease subunit -
  NSQ18_RS08650 (NSQ18_08650) - 1761175..1761942 (+) 768 WP_016838351.1 ABC transporter ATP-binding protein -
  NSQ18_RS08655 (NSQ18_08655) - 1762148..1763176 (+) 1029 WP_339287734.1 siderophore ABC transporter substrate-binding protein -
  NSQ18_RS08660 (NSQ18_08660) - 1763410..1764006 (+) 597 WP_016838349.1 phosphatase PAP2 family protein -
  NSQ18_RS08665 (NSQ18_08665) zupT 1764133..1764948 (+) 816 WP_016838348.1 zinc transporter ZupT -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34763.97 Da        Isoelectric Point: 9.5266

>NTDB_id=965667 NSQ18_RS08640 WP_016838353.1 1759279..1760232(+) (ceuB) [Ureibacillus sp. FSL K6-0786]
MRLWMLLVAAIILSLISLFIGAIDIKPTDLLDWESQETQIFLISRVPRLLAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGILISILLFSQAAYMQKIIFSFVFAFAGTILFMQILDRIKFKDAIFVPLIGIMYGNILSSITTFFAYEGDLI
QNINTWLMGSFTLIISGRYELLYVSVPAIILAYLYANKFTVAGMGEDFAKNLGLSYKAVLNLGLILVATISTTVVLTVGV
IPFLGLIVPNIVSIYMGDNLRKTIPHTIVLGVVFLLVCDIIGRVVVYPYEIPVNVTVAVIGSLLFLIMLFRGRAYAK

Nucleotide


Download         Length: 954 bp        

>NTDB_id=965667 NSQ18_RS08640 WP_016838353.1 1759279..1760232(+) (ceuB) [Ureibacillus sp. FSL K6-0786]
ATGAGACTATGGATGTTGTTAGTGGCAGCAATTATCCTGTCACTCATTTCGCTATTCATTGGAGCAATCGATATAAAACC
TACTGATTTACTAGACTGGGAATCACAAGAAACCCAAATATTTCTAATTAGTAGGGTCCCTCGATTACTTGCCATTATTT
TAGCGGGTGCAGGAATGAGTATTGCTGGTTTAATTATGCAAAGTTTAAGTAGAAATAAGTTCGTATCACCTACGACAGCA
GGTACTCTAGATGCAGCTAAGTTAGGGATTCTTATTTCGATTTTGTTATTCTCACAAGCTGCATATATGCAAAAAATAAT
TTTTAGCTTTGTGTTTGCATTTGCAGGTACGATTTTATTTATGCAAATTTTAGACCGCATTAAATTTAAAGATGCGATTT
TCGTTCCCTTAATCGGTATTATGTATGGAAATATTTTATCCTCCATTACGACATTTTTTGCGTATGAAGGGGATTTGATT
CAAAACATAAATACTTGGTTAATGGGTAGTTTTACACTCATTATTTCAGGACGTTATGAGCTGTTATATGTAAGTGTTCC
TGCCATTATCTTGGCTTATTTATATGCGAATAAATTCACGGTTGCCGGAATGGGTGAAGACTTTGCAAAAAATTTAGGCT
TAAGTTATAAAGCAGTGTTGAACCTCGGTTTAATTCTTGTTGCGACCATTTCTACGACCGTTGTATTAACAGTCGGTGTA
ATACCTTTTCTAGGTTTGATTGTTCCGAATATTGTCTCAATCTATATGGGGGACAACTTGCGTAAAACGATTCCACATAC
AATTGTACTGGGAGTTGTTTTCTTATTAGTTTGCGACATTATTGGTCGAGTAGTGGTTTATCCATACGAAATACCGGTCA
ATGTAACAGTTGCAGTAATTGGTAGTTTGCTCTTCTTAATTATGTTGTTTAGGGGGAGAGCATATGCGAAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A840PUI1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

99.685

0.524

Multiple sequence alignment