Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | ACJ228_RS06150 | Genome accession | NZ_CP175642 |
| Coordinates | 1301781..1302296 (+) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain G7 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1296781..1307296
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJ228_RS06130 (ACJ228_06130) | - | 1297112..1298572 (+) | 1461 | WP_000004974.1 | amino acid permease | - |
| ACJ228_RS06135 (ACJ228_06135) | - | 1298850..1300055 (+) | 1206 | WP_000512708.1 | RtcB family protein | - |
| ACJ228_RS06140 (ACJ228_06140) | - | 1300074..1300217 (+) | 144 | WP_162138624.1 | hypothetical protein | - |
| ACJ228_RS06145 (ACJ228_06145) | omp38 | 1300340..1301401 (-) | 1062 | WP_000777885.1 | outer membrane protein Omp38 | - |
| ACJ228_RS06150 (ACJ228_06150) | fimT | 1301781..1302296 (+) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| ACJ228_RS06155 (ACJ228_06155) | - | 1302405..1303580 (+) | 1176 | WP_000129968.1 | thiolase family protein | - |
| ACJ228_RS06160 (ACJ228_06160) | - | 1303707..1304150 (+) | 444 | WP_001176585.1 | VOC family protein | - |
| ACJ228_RS06165 (ACJ228_06165) | - | 1304193..1304546 (-) | 354 | WP_000457783.1 | multidrug efflux SMR transporter | - |
| ACJ228_RS06170 (ACJ228_06170) | - | 1304629..1305114 (-) | 486 | WP_000935247.1 | DUF934 domain-containing protein | - |
| ACJ228_RS06175 (ACJ228_06175) | - | 1305107..1306750 (-) | 1644 | WP_000281764.1 | nitrite/sulfite reductase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=965667 ACJ228_RS06150 WP_000477151.1 1301781..1302296(+) (fimT) [Acinetobacter baumannii strain G7]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=965667 ACJ228_RS06150 WP_000477151.1 1301781..1302296(+) (fimT) [Acinetobacter baumannii strain G7]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAT
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAT
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |