Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   AABJ90_RS00090 Genome accession   NZ_AP028964
Coordinates   19014..19862 (+) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis strain NA05 = NBRC 116153     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 14014..24862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABJ90_RS00070 (BsubNA05_00140) rsmG 15829..16548 (+) 720 WP_338382298.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  AABJ90_RS00075 (BsubNA05_00150) noc 16670..17521 (+) 852 WP_015250778.1 nucleoid occlusion protein -
  AABJ90_RS00080 (BsubNA05_00160) yyaB 17572..18012 (-) 441 WP_128993629.1 PH domain-containing protein -
  AABJ90_RS00085 (BsubNA05_00170) soj 18260..19021 (+) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  AABJ90_RS00090 (BsubNA05_00180) spo0J 19014..19862 (+) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  AABJ90_RS00095 (BsubNA05_00190) yyaC 19901..20518 (-) 618 WP_043858422.1 spore protease YyaC -
  AABJ90_RS00100 (BsubNA05_00200) - 20959..21975 (+) 1017 WP_338382696.1 hypothetical protein -
  AABJ90_RS00105 (BsubNA05_00210) yyzM 22069..22275 (+) 207 WP_003226838.1 DUF951 family protein -
  AABJ90_RS00110 (BsubNA05_00220) yyaE 22326..24329 (+) 2004 WP_338382304.1 molybdopterin-dependent oxidoreductase -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=96563 AABJ90_RS00090 WP_003226832.1 19014..19862(+) (spo0J) [Bacillus subtilis strain NA05 = NBRC 116153]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=96563 AABJ90_RS00090 WP_003226832.1 19014..19862(+) (spo0J) [Bacillus subtilis strain NA05 = NBRC 116153]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCCTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGACCTCACGCAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAACAGCTTATTGCCGAAGGCACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCGTAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387