Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   ACKFA7_RS15235 Genome accession   NZ_CP175553
Coordinates   3142438..3143799 (-) Length   453 a.a.
NCBI ID   WP_038459775.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain 4-9-2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3137438..3148799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKFA7_RS15210 (ACKFA7_15210) - 3137545..3138369 (-) 825 WP_014418835.1 ABC transporter ATP-binding protein -
  ACKFA7_RS15215 (ACKFA7_15215) - 3138525..3138962 (-) 438 WP_076851275.1 YusW family protein -
  ACKFA7_RS15220 (ACKFA7_15220) - 3139081..3140862 (-) 1782 WP_076851276.1 M3 family oligoendopeptidase -
  ACKFA7_RS15225 (ACKFA7_15225) - 3140995..3141837 (+) 843 WP_076851277.1 oxidoreductase -
  ACKFA7_RS15230 (ACKFA7_15230) - 3141927..3142391 (+) 465 WP_038459773.1 Dps family protein -
  ACKFA7_RS15235 (ACKFA7_15235) htrA 3142438..3143799 (-) 1362 WP_038459775.1 S1C family serine protease Regulator
  ACKFA7_RS15240 (ACKFA7_15240) - 3144076..3144753 (+) 678 WP_007613651.1 response regulator transcription factor -
  ACKFA7_RS15245 (ACKFA7_15245) - 3144750..3146105 (+) 1356 WP_038459777.1 cell wall metabolism sensor histidine kinase WalK -
  ACKFA7_RS15250 (ACKFA7_15250) spxO 3146134..3146298 (-) 165 WP_007410067.1 anti-adapter protein SpxO -
  ACKFA7_RS15255 (ACKFA7_15255) - 3146477..3147352 (+) 876 WP_038459779.1 TetR/AcrR family transcriptional regulator -
  ACKFA7_RS15260 (ACKFA7_15260) fumC 3147389..3148777 (-) 1389 WP_014418844.1 class II fumarate hydratase -

Sequence

Protein


Download         Length: 453 a.a.        Molecular weight: 47944.36 Da        Isoelectric Point: 4.8598

>NTDB_id=965620 ACKFA7_RS15235 WP_038459775.1 3142438..3143799(-) (htrA) [Bacillus amyloliquefaciens strain 4-9-2]
MNDHRDDGRSRDQSDLSHTEQNRNEQQQISHQEPELLEEPVSKEAENETAAGTEFEKTAAVKKEKKRRAAWLSPVLGGII
GGGLVLGIVPNLPSEQHKTEAVSDTKQVQSSNFTSTPLKNTSSVADMVEDLEPAIVGVSNYQASQSSQFGLDGGSSSETE
SGTGSGVIFKKDGEKAYIITNNHVVEGANKLSVTLYNGKSETAKLVGKDAISDLAVLEISSSNVKKAASFGDSSKLRIAD
KVIAIGNPLGQQFSGTVTQGVISGLNRTVDADTSQGTVEMNVIQTDAAINPGNSGGPLINSSGQVIGINSMKVSENGVES
LGFAIPSNDVEPIVDQLLAKGKVERPFLGVQMIDMSQVPETYQENTLGLFGDQLSKGVYVKEVQSGSPAAKAGIKSNDVI
VQLNGKDVGSSADIRQILYNQLKIGDKTTVQVLRNGSKKTLNVTLTKQTESAS

Nucleotide


Download         Length: 1362 bp        

>NTDB_id=965620 ACKFA7_RS15235 WP_038459775.1 3142438..3143799(-) (htrA) [Bacillus amyloliquefaciens strain 4-9-2]
ATGAATGATCATCGAGATGACGGCAGAAGCCGTGATCAGTCAGATCTTTCACATACGGAACAAAACAGAAATGAACAGCA
GCAGATCAGCCATCAGGAGCCCGAGCTGCTTGAAGAGCCCGTCTCGAAAGAAGCGGAAAACGAGACGGCGGCCGGTACGG
AATTTGAAAAAACGGCTGCCGTGAAAAAAGAAAAAAAACGGAGAGCCGCTTGGCTGAGCCCGGTTTTAGGCGGCATTATC
GGCGGCGGCCTCGTGCTTGGCATTGTGCCGAACCTGCCGAGTGAGCAGCATAAGACAGAAGCCGTTTCTGATACGAAACA
AGTTCAGTCTTCGAATTTTACGTCAACGCCTTTGAAAAATACCTCAAGCGTAGCGGATATGGTAGAAGATTTGGAGCCCG
CGATTGTGGGAGTGTCCAACTACCAAGCTTCGCAAAGCAGCCAGTTCGGACTTGACGGCGGTTCAAGCTCTGAAACGGAA
AGCGGCACGGGGTCAGGCGTCATCTTCAAAAAAGACGGCGAAAAAGCGTACATCATTACAAACAACCATGTCGTAGAAGG
GGCGAACAAACTGTCGGTCACTCTTTACAATGGGAAATCCGAAACGGCAAAGCTTGTCGGAAAGGATGCCATCAGTGACT
TGGCTGTGTTGGAAATCAGCTCGTCCAATGTCAAAAAAGCGGCCAGCTTCGGGGATTCCTCCAAGCTCCGCATTGCCGAT
AAAGTGATTGCCATCGGCAACCCGCTCGGCCAGCAGTTTTCCGGCACCGTCACACAAGGTGTCATCAGCGGGCTGAACAG
AACGGTAGATGCCGATACATCCCAAGGCACGGTGGAAATGAACGTGATTCAGACGGATGCGGCGATTAACCCCGGAAACA
GCGGCGGCCCGTTAATCAACTCAAGCGGCCAGGTTATCGGGATCAACAGCATGAAAGTCAGTGAAAACGGCGTGGAGTCA
CTCGGTTTTGCCATTCCAAGCAATGATGTAGAACCGATAGTCGACCAGCTCCTTGCAAAAGGAAAAGTCGAGCGCCCATT
TTTAGGTGTGCAGATGATTGACATGTCGCAAGTGCCGGAAACCTATCAGGAAAACACGCTCGGACTGTTCGGCGACCAGC
TGTCTAAGGGTGTTTACGTAAAAGAAGTGCAATCCGGCTCACCGGCTGCGAAAGCGGGCATTAAATCCAATGACGTCATT
GTACAATTGAACGGCAAAGATGTCGGCAGCAGCGCCGATATCAGACAGATCCTATATAACCAGCTGAAAATCGGCGATAA
AACGACTGTTCAAGTTCTCAGAAACGGAAGCAAAAAGACGCTGAACGTCACATTAACGAAACAAACCGAAAGCGCAAGCT
GA

Domains

Predicted by InterProScan.

Trypsin-like peptidase domain (Trypsin_2)

(164-308)

Peptidase family M50 (Peptidase_M50)

(366-451)

PDZ domain (PDZ_2)

(346-445)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

41.414

87.417

0.362