Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NSQ94_RS13720 Genome accession   NZ_CP150189
Coordinates   2834894..2835844 (-) Length   316 a.a.
NCBI ID   WP_066248363.1    Uniprot ID   -
Organism   Aeribacillus sp. FSL K6-2833     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2829894..2840844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ94_RS13700 (NSQ94_13700) - 2831193..2831972 (-) 780 WP_063387006.1 DUF2268 domain-containing protein -
  NSQ94_RS13705 (NSQ94_13705) fabF 2832106..2833350 (-) 1245 WP_063387007.1 beta-ketoacyl-ACP synthase II -
  NSQ94_RS13710 (NSQ94_13710) - 2833420..2834352 (-) 933 WP_063387008.1 beta-ketoacyl-ACP synthase III -
  NSQ94_RS13715 (NSQ94_13715) - 2834566..2834838 (+) 273 WP_063387009.1 hypothetical protein -
  NSQ94_RS13720 (NSQ94_13720) med 2834894..2835844 (-) 951 WP_066248363.1 BMP family ABC transporter substrate-binding protein Regulator
  NSQ94_RS13725 (NSQ94_13725) - 2836119..2836967 (-) 849 WP_339229421.1 hypothetical protein -
  NSQ94_RS13730 (NSQ94_13730) - 2837106..2837843 (-) 738 WP_339229423.1 hypothetical protein -
  NSQ94_RS13735 (NSQ94_13735) - 2837990..2838172 (+) 183 WP_063387013.1 YjzD family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35589.73 Da        Isoelectric Point: 4.8537

>NTDB_id=965582 NSQ94_RS13720 WP_066248363.1 2834894..2835844(-) (med) [Aeribacillus sp. FSL K6-2833]
MYKKMFVIIFILLFLVGCGQASEKGKLKKVGLLVPETINDQVWGTKGYKGLLKIQSELNVDVFYKEGMNSEAAVREAVEE
FHGKGVNLIIGHGHEYEGFFRDLLDQYPDIHFVFFNGDAKGPNATSLNFEAHAMGFFAGMVAAHMTKTNEIGIIAAFEWQ
PEVEGFYQGAQFENPNVTIHIEYVQGFDHVDLALEKLDKLVAENVDVVYPAGDRYNVPVIEKVKEKGIYSIGFVSDQSDL
GEQMVLTSTVQHVDELYLLVAKKFIKGELESGNLYFDFQDGVIDLGKFSPLVDKEFKNKVLKYVEEYKKTGKLPNE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=965582 NSQ94_RS13720 WP_066248363.1 2834894..2835844(-) (med) [Aeribacillus sp. FSL K6-2833]
ATGTATAAAAAAATGTTTGTGATCATTTTTATTTTATTATTTCTCGTTGGCTGCGGACAAGCATCAGAAAAAGGAAAACT
GAAAAAGGTGGGTTTGCTCGTTCCTGAAACGATTAATGATCAAGTTTGGGGGACAAAAGGGTATAAAGGGCTGTTAAAAA
TTCAGTCTGAGCTGAATGTAGATGTTTTTTATAAAGAAGGAATGAATTCCGAAGCGGCGGTGAGGGAGGCGGTCGAAGAA
TTTCACGGAAAGGGAGTTAATTTAATTATCGGGCACGGTCACGAATATGAGGGTTTTTTTAGAGATTTGCTGGATCAATA
TCCAGATATTCATTTCGTTTTTTTTAATGGTGATGCAAAAGGCCCGAATGCCACAAGTTTAAATTTTGAGGCGCATGCCA
TGGGCTTTTTCGCAGGAATGGTGGCAGCACATATGACAAAAACAAACGAAATCGGAATTATTGCCGCTTTTGAGTGGCAG
CCTGAAGTGGAGGGGTTTTATCAAGGGGCGCAATTTGAAAATCCAAACGTAACCATTCACATTGAATATGTCCAAGGGTT
TGATCATGTTGACTTGGCGCTTGAGAAGCTCGATAAGCTTGTCGCAGAAAATGTAGATGTTGTTTATCCGGCAGGCGACA
GATACAACGTGCCAGTGATCGAAAAAGTGAAGGAAAAAGGAATATATTCAATTGGCTTTGTTTCAGATCAAAGTGATTTG
GGCGAACAAATGGTTTTAACAAGCACAGTACAGCATGTGGATGAGTTGTATTTATTAGTCGCAAAAAAATTTATAAAAGG
CGAACTGGAAAGCGGGAATTTATATTTTGATTTTCAAGATGGTGTGATTGATTTAGGGAAGTTCAGCCCTCTAGTAGATA
AAGAATTTAAAAATAAAGTTTTAAAATATGTGGAAGAATATAAGAAAACAGGGAAATTGCCTAACGAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.503

99.367

0.532

Multiple sequence alignment