Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   NSQ94_RS13655 Genome accession   NZ_CP150189
Coordinates   2819806..2821623 (-) Length   605 a.a.
NCBI ID   WP_063386997.1    Uniprot ID   -
Organism   Aeribacillus sp. FSL K6-2833     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 2814806..2826623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ94_RS13620 (NSQ94_13620) - 2815194..2815823 (-) 630 WP_063387496.1 GTP pyrophosphokinase family protein -
  NSQ94_RS13625 (NSQ94_13625) - 2815836..2816204 (-) 369 WP_339229413.1 hypothetical protein -
  NSQ94_RS13630 (NSQ94_13630) - 2816317..2816907 (+) 591 WP_144596603.1 CYTH domain-containing protein -
  NSQ94_RS13635 (NSQ94_13635) - 2816907..2817509 (+) 603 WP_082830278.1 lytic transglycosylase domain-containing protein -
  NSQ94_RS13640 (NSQ94_13640) - 2817807..2818217 (+) 411 WP_339199165.1 hypothetical protein -
  NSQ94_RS13645 (NSQ94_13645) - 2818231..2819091 (+) 861 WP_232515740.1 ClpXP adapter SpxH family protein -
  NSQ94_RS13650 (NSQ94_13650) - 2819462..2819635 (+) 174 WP_162536160.1 hypothetical protein -
  NSQ94_RS13655 (NSQ94_13655) pepF 2819806..2821623 (-) 1818 WP_063386997.1 oligoendopeptidase F Regulator
  NSQ94_RS13660 (NSQ94_13660) - 2821707..2822900 (-) 1194 WP_339229416.1 competence protein CoiA family protein -
  NSQ94_RS13665 (NSQ94_13665) cls 2823189..2824700 (-) 1512 WP_063386999.1 cardiolipin synthase -
  NSQ94_RS13670 (NSQ94_13670) mecA 2824819..2825481 (-) 663 WP_066248347.1 adaptor protein MecA -
  NSQ94_RS13675 (NSQ94_13675) - 2825750..2826406 (+) 657 WP_063387001.1 TerC family protein -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 70038.73 Da        Isoelectric Point: 4.8668

>NTDB_id=965580 NSQ94_RS13655 WP_063386997.1 2819806..2821623(-) (pepF) [Aeribacillus sp. FSL K6-2833]
MGNETAVKRLPKREEIPVEYTWRLEDIFASDDEWEKEFEEVKQLIPKIGEYRGKLGQSSDLLYEALSYQDSVMERLGKLY
TYAHMRYDQDTTNSFYQGLNDRAANLYTQASSLSSYIVPEILSIEEEKLQQFLKENDQLKLYAHALDEINRQRPHVLDAE
QEAILAQAAEALSTASNTFGKLNNADLEFPAIKDENGEEVEITHGRYIQFLESENRRVRRDAFQALYATYGKFKNTFAST
LSGAVKKNNFYAKVRKYENARQAALSANNIPEEVYDNLVKTINEHLPLLHRYVDLRKKALKLDELHMYDLYTPLVQNVDM
KITYEEAKDIVLKGLAPLGEEYVGILQEGFENRWIDVKENKGKRSGAYSSGAYGTNPYILLNWQDNVNNLFTLVHELGHS
VHSYYTRKTQPYPYGDYSIFVAEVASTCNENLLNEYLLNTIDDEKKRLYLLNHFLEGFRGTVFRQTMFAEFEHYIHLKAQ
NGEPLTPEFLTQTYYELNKKYFGDNIVVDEEIGLEWARIPHFYYNFYVYQYATGFSAASALSKQILSEGETAVERYINFL
KAGSSDYPINVLKKAGVDMTSTKPIEDACKVFEEKLTEMEELLLK

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=965580 NSQ94_RS13655 WP_063386997.1 2819806..2821623(-) (pepF) [Aeribacillus sp. FSL K6-2833]
ATGGGCAATGAAACAGCTGTCAAAAGGCTGCCAAAACGGGAAGAAATCCCTGTTGAGTATACTTGGCGGCTAGAAGATAT
TTTTGCTTCTGATGATGAATGGGAAAAAGAATTTGAAGAAGTAAAGCAGCTAATTCCAAAAATCGGTGAATATAGAGGAA
AATTAGGTCAATCCTCCGATCTGTTATATGAGGCGCTCTCTTATCAAGATTCCGTGATGGAGAGGCTTGGAAAGCTTTAT
ACATATGCCCATATGCGCTACGATCAAGATACAACTAATTCTTTTTATCAAGGATTGAATGACCGGGCAGCAAATCTTTA
TACACAAGCTTCCAGCCTCTCATCCTATATCGTTCCGGAAATACTATCCATTGAAGAAGAAAAGCTTCAGCAATTTTTGA
AAGAAAATGATCAATTGAAGCTTTATGCACATGCCTTGGACGAAATCAACCGGCAAAGACCGCACGTGCTCGATGCGGAG
CAAGAGGCTATTTTAGCTCAAGCTGCGGAAGCCCTGAGCACTGCCTCCAATACGTTTGGAAAATTAAATAATGCGGACTT
GGAATTTCCAGCAATTAAGGATGAAAATGGAGAAGAAGTGGAAATCACTCACGGCCGTTATATCCAGTTTTTGGAGAGTG
AAAATAGACGAGTCCGTCGCGATGCGTTCCAAGCATTATACGCAACATATGGAAAATTTAAAAATACGTTTGCCAGCACA
TTAAGCGGAGCTGTTAAGAAAAATAATTTTTATGCGAAGGTGCGGAAATATGAGAATGCTCGCCAGGCTGCACTAAGCGC
CAACAACATTCCCGAGGAAGTCTACGACAATTTAGTAAAAACGATCAATGAACATTTGCCGCTGCTCCATCGTTATGTCG
ATTTGCGGAAAAAAGCGCTGAAGCTTGATGAACTTCATATGTATGATCTTTATACGCCGCTTGTACAAAACGTCGATATG
AAAATCACGTATGAAGAAGCGAAAGACATCGTATTGAAGGGGCTTGCTCCATTAGGTGAAGAATATGTCGGCATTTTACA
AGAAGGCTTTGAAAACAGATGGATTGACGTTAAGGAGAATAAAGGGAAACGAAGCGGAGCTTACTCCTCTGGCGCCTATG
GAACAAATCCATATATTTTGCTGAATTGGCAAGATAATGTGAACAATTTATTCACACTTGTTCACGAGCTTGGCCATTCG
GTGCACAGCTACTATACAAGAAAAACACAGCCGTATCCGTACGGAGATTATTCTATTTTTGTCGCGGAAGTGGCTTCTAC
ATGCAATGAAAACTTGTTAAATGAATATTTGCTCAACACGATCGATGATGAAAAGAAACGTTTATACTTGCTGAATCATT
TCCTTGAGGGGTTTAGAGGAACGGTATTCCGGCAAACGATGTTTGCTGAGTTTGAACATTATATCCATTTGAAGGCGCAA
AACGGAGAGCCGCTCACACCGGAATTTTTGACGCAAACGTATTATGAGTTAAACAAAAAATATTTTGGTGACAACATTGT
GGTCGATGAAGAAATTGGCTTAGAATGGGCAAGAATTCCGCATTTTTATTACAATTTTTACGTTTATCAATACGCAACAG
GCTTTAGTGCTGCAAGCGCCTTGAGCAAGCAGATTTTATCGGAAGGAGAAACTGCCGTTGAAAGGTACATTAATTTCTTG
AAAGCGGGAAGCTCTGATTATCCGATTAATGTGCTGAAAAAAGCAGGGGTCGATATGACATCAACCAAGCCGATTGAAGA
TGCATGCAAAGTATTTGAAGAAAAGCTGACGGAGATGGAGGAGCTGCTGTTAAAGTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(210-590)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

51.265

98.017

0.502

Multiple sequence alignment