Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSQ94_RS02805 Genome accession   NZ_CP150189
Coordinates   559043..559996 (+) Length   317 a.a.
NCBI ID   WP_063386800.1    Uniprot ID   -
Organism   Aeribacillus sp. FSL K6-2833     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 554043..564996
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ94_RS02790 (NSQ94_02790) - 555221..556075 (+) 855 WP_311066527.1 Cof-type HAD-IIB family hydrolase -
  NSQ94_RS02795 (NSQ94_02795) ltrA 556735..557994 (+) 1260 WP_066251748.1 group II intron reverse transcriptase/maturase -
  NSQ94_RS02800 (NSQ94_02800) - 558182..558658 (-) 477 WP_063386801.1 N-acetyltransferase -
  NSQ94_RS02805 (NSQ94_02805) ceuB 559043..559996 (+) 954 WP_063386800.1 ABC transporter permease Machinery gene
  NSQ94_RS02810 (NSQ94_02810) - 559986..560936 (+) 951 WP_066249998.1 iron chelate uptake ABC transporter family permease subunit -
  NSQ94_RS02815 (NSQ94_02815) - 560930..561688 (+) 759 WP_063386798.1 ABC transporter ATP-binding protein -
  NSQ94_RS02820 (NSQ94_02820) - 561854..562810 (+) 957 WP_066249994.1 siderophore ABC transporter substrate-binding protein -
  NSQ94_RS02825 (NSQ94_02825) - 563304..564374 (-) 1071 WP_339230052.1 hypothetical protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34892.98 Da        Isoelectric Point: 9.8243

>NTDB_id=965557 NSQ94_RS02805 WP_063386800.1 559043..559996(+) (ceuB) [Aeribacillus sp. FSL K6-2833]
MKKRYLIIALIILSIASIFIGVNDIKPTDIFNLTDEQIQILIISRIPRVISIIIAGTSISIAGLIMQQLSRNKFVSPTTA
GTMDSARLGILVAIMVFADASPIQKMIVAFAFALLGTFIFMKILEKIKYKDTIFVPLVGLMFGNIIGSITTFFAYKNNLI
QNVSSWLEGDFSLILKGQYELLYVSIPFVLIAYLYANQFTVAGMGEEFSKNLGLNYKQVVNIGLVIVALITSSVVLTVGT
IPFLGLVVPNIVAIYNGDHLKKNLIHTALLGAVFVMFCDILGRIIIYPYEISISLTVGVIGSAIFVYLLMRRKAYGL

Nucleotide


Download         Length: 954 bp        

>NTDB_id=965557 NSQ94_RS02805 WP_063386800.1 559043..559996(+) (ceuB) [Aeribacillus sp. FSL K6-2833]
ATGAAAAAACGATATTTGATCATTGCTCTCATTATCCTTTCAATTGCATCGATTTTTATCGGAGTAAACGATATTAAACC
AACTGATATATTCAATTTGACAGATGAACAAATACAAATTTTGATCATCAGCAGAATTCCGCGCGTCATTAGCATTATTA
TTGCAGGAACGAGTATAAGCATTGCCGGTCTTATTATGCAGCAGCTGAGCAGAAACAAGTTCGTTTCCCCAACTACGGCA
GGAACAATGGATTCCGCCAGATTGGGGATTTTAGTTGCGATCATGGTTTTTGCAGACGCTAGTCCGATTCAAAAAATGAT
TGTCGCTTTTGCTTTTGCACTTTTAGGAACATTTATCTTTATGAAAATATTAGAAAAAATTAAATATAAAGATACTATTT
TTGTTCCTCTAGTCGGGCTGATGTTCGGCAATATCATTGGATCTATCACTACTTTTTTTGCATACAAAAATAATTTGATT
CAAAATGTTTCCTCATGGCTGGAAGGAGATTTTTCGTTAATTTTAAAAGGTCAATATGAATTATTGTACGTCAGTATTCC
TTTTGTATTAATTGCATACTTGTATGCGAATCAATTCACTGTCGCTGGAATGGGAGAGGAATTTTCGAAAAATTTAGGCT
TGAATTATAAACAAGTTGTCAATATCGGACTTGTTATCGTAGCTTTGATCACTTCATCTGTTGTATTGACGGTTGGAACC
ATTCCGTTTCTAGGTCTTGTCGTTCCGAATATTGTCGCCATATACAATGGAGACCATTTGAAAAAGAATTTGATTCATAC
CGCTTTGCTCGGTGCTGTTTTCGTTATGTTTTGCGATATTTTAGGGCGAATCATTATATATCCGTACGAAATCTCGATCA
GCTTAACCGTCGGTGTTATCGGCAGTGCCATTTTTGTTTACTTACTTATGAGGAGAAAAGCATATGGGTTATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.313

98.738

0.536

Multiple sequence alignment