Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ACKFA7_RS00065 Genome accession   NZ_CP175553
Coordinates   10067..10894 (+) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain 4-9-2     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 5067..15894
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKFA7_RS00040 (ACKFA7_00040) - 6142..7575 (+) 1434 WP_038463551.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ACKFA7_RS00045 (ACKFA7_00045) tmk 7572..8210 (+) 639 WP_038463554.1 dTMP kinase -
  ACKFA7_RS00050 (ACKFA7_00050) darA 8281..8610 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  ACKFA7_RS00055 (ACKFA7_00055) - 8623..9063 (+) 441 WP_004264730.1 YaaR family protein -
  ACKFA7_RS00060 (ACKFA7_00060) holB 9075..10064 (+) 990 WP_038456664.1 DNA polymerase III subunit delta' -
  ACKFA7_RS00065 (ACKFA7_00065) yaaT 10067..10894 (+) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  ACKFA7_RS00070 (ACKFA7_00070) yabA 10909..11268 (+) 360 WP_004264720.1 replication initiation-control protein YabA -
  ACKFA7_RS00075 (ACKFA7_00075) - 11329..12072 (+) 744 WP_038456667.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ACKFA7_RS00080 (ACKFA7_00080) - 12059..12358 (+) 300 WP_038456669.1 GIY-YIG nuclease family protein -
  ACKFA7_RS00085 (ACKFA7_00085) rsmI 12333..13214 (+) 882 WP_038463560.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACKFA7_RS00090 (ACKFA7_00090) abrB 13264..13554 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=965500 ACKFA7_RS00065 WP_004264723.1 10067..10894(+) (yaaT) [Bacillus amyloliquefaciens strain 4-9-2]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=965500 ACKFA7_RS00065 WP_004264723.1 10067..10894(+) (yaaT) [Bacillus amyloliquefaciens strain 4-9-2]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGAAAAATTTATTACTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACATTTGACCGCAATAAAGTCATTTTTTACTTTACAGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGACCA
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGCGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967