Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NSQ22_RS12775 | Genome accession | NZ_CP150187 |
| Coordinates | 2511738..2512808 (-) | Length | 356 a.a. |
| NCBI ID | WP_029760727.1 | Uniprot ID | - |
| Organism | Geobacillus sp. FSL K6-3411 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2506738..2517808
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ22_RS12735 (NSQ22_12735) | - | 2507571..2508365 (+) | 795 | WP_008879844.1 | YqhG family protein | - |
| NSQ22_RS12740 (NSQ22_12740) | - | 2508442..2508621 (-) | 180 | WP_008879845.1 | YqzE family protein | - |
| NSQ22_RS12745 (NSQ22_12745) | comGG | 2508667..2509056 (-) | 390 | WP_008879846.1 | competence type IV pilus minor pilin ComGG | - |
| NSQ22_RS12750 (NSQ22_12750) | comGF | 2509190..2509633 (-) | 444 | WP_339263576.1 | competence type IV pilus minor pilin ComGF | - |
| NSQ22_RS12755 (NSQ22_12755) | - | 2509612..2509938 (-) | 327 | WP_339263578.1 | competence protein ComG | - |
| NSQ22_RS12760 (NSQ22_12760) | comGD | 2509922..2510359 (-) | 438 | WP_008879849.1 | competence type IV pilus minor pilin ComGD | - |
| NSQ22_RS12765 (NSQ22_12765) | comGC | 2510349..2510645 (-) | 297 | WP_011887800.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NSQ22_RS12770 (NSQ22_12770) | comGB | 2510713..2511741 (-) | 1029 | WP_008879851.1 | competence type IV pilus assembly protein ComGB | - |
| NSQ22_RS12775 (NSQ22_12775) | comGA | 2511738..2512808 (-) | 1071 | WP_029760727.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NSQ22_RS12780 (NSQ22_12780) | - | 2513008..2513706 (+) | 699 | WP_008879853.1 | helix-turn-helix domain-containing protein | - |
| NSQ22_RS12785 (NSQ22_12785) | - | 2513870..2514112 (+) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| NSQ22_RS12790 (NSQ22_12790) | - | 2514143..2515270 (-) | 1128 | WP_035499228.1 | SAM-dependent methyltransferase | - |
| NSQ22_RS12795 (NSQ22_12795) | - | 2515502..2516134 (-) | 633 | WP_008879856.1 | MBL fold metallo-hydrolase | - |
| NSQ22_RS12800 (NSQ22_12800) | - | 2516314..2516490 (+) | 177 | WP_008879857.1 | DUF2759 domain-containing protein | - |
| NSQ22_RS12805 (NSQ22_12805) | - | 2516526..2517689 (-) | 1164 | WP_011887806.1 | M14 family metallocarboxypeptidase | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 39595.73 Da Isoelectric Point: 8.6314
>NTDB_id=965484 NSQ22_RS12775 WP_029760727.1 2511738..2512808(-) (comGA) [Geobacillus sp. FSL K6-3411]
MDDIEQVANRLLAEAVQRRASDLHLVPRRHDAIIRLRLDGMLIDVGTISKETAERVIVHFKFLAGMDIGERRRPQSGAME
VNESGETVYLRLSTLPTLYDESLVIRLLPQRFSLPLRELSLFSHSTARLFSFMQQPQGLVLLTGPTGSGKTTTLYTLLDV
CQAERQRNIITLEDPIEKRNDRFLQVQINEKAGITYAASLKAALRHDPDVLMVGEIRDHDTAAIAVRSALTGHLVVSTMH
AADAVGAVYRLHEFGVSPGDLAETLLAVSAQRLVELRCPLCGDNCHPACRRLQRRRRAAVHELLYGSALFDVIRSLSGEG
EQRLRPHLTLARLIRKGIALGYLPTRALELVGGGER
MDDIEQVANRLLAEAVQRRASDLHLVPRRHDAIIRLRLDGMLIDVGTISKETAERVIVHFKFLAGMDIGERRRPQSGAME
VNESGETVYLRLSTLPTLYDESLVIRLLPQRFSLPLRELSLFSHSTARLFSFMQQPQGLVLLTGPTGSGKTTTLYTLLDV
CQAERQRNIITLEDPIEKRNDRFLQVQINEKAGITYAASLKAALRHDPDVLMVGEIRDHDTAAIAVRSALTGHLVVSTMH
AADAVGAVYRLHEFGVSPGDLAETLLAVSAQRLVELRCPLCGDNCHPACRRLQRRRRAAVHELLYGSALFDVIRSLSGEG
EQRLRPHLTLARLIRKGIALGYLPTRALELVGGGER
Nucleotide
Download Length: 1071 bp
>NTDB_id=965484 NSQ22_RS12775 WP_029760727.1 2511738..2512808(-) (comGA) [Geobacillus sp. FSL K6-3411]
CTGGATGATATCGAACAAGTAGCGAACCGTCTCCTCGCCGAAGCGGTGCAACGCCGCGCCTCTGACCTTCATCTCGTCCC
GCGCCGACATGATGCGATCATTCGCCTCCGCCTTGACGGCATGCTCATCGATGTTGGTACAATCTCGAAAGAAACCGCTG
AACGCGTCATCGTCCATTTCAAATTTTTGGCTGGCATGGATATTGGCGAACGCCGTCGTCCGCAAAGCGGCGCGATGGAA
GTGAATGAGTCCGGGGAAACGGTGTATTTGCGCTTATCCACGCTGCCGACGCTTTATGATGAAAGCCTCGTCATCCGCCT
TCTACCGCAGCGCTTTTCGCTGCCGCTTCGTGAACTATCCTTATTTTCCCACTCCACCGCACGATTGTTTTCCTTTATGC
AGCAGCCACAAGGACTCGTGTTGCTGACCGGCCCAACCGGGTCGGGAAAGACGACGACATTGTATACGCTTCTCGACGTT
TGCCAAGCGGAAAGACAACGTAACATTATCACGTTGGAAGATCCGATTGAAAAGCGGAATGATCGGTTTTTGCAAGTGCA
GATCAATGAAAAAGCAGGTATCACGTATGCAGCCAGCTTGAAAGCCGCTTTGCGCCATGACCCGGATGTGTTAATGGTCG
GCGAGATCCGCGACCATGATACGGCAGCGATCGCCGTACGATCAGCGTTGACAGGGCACTTGGTGGTATCGACCATGCAT
GCTGCTGATGCAGTCGGCGCAGTGTATCGGCTCCATGAGTTCGGGGTGTCTCCCGGCGACTTGGCTGAGACGTTGCTTGC
TGTTTCGGCGCAGCGTCTTGTTGAGCTTCGCTGCCCGCTATGCGGTGACAATTGCCATCCGGCTTGTCGTCGGCTTCAAC
GAAGACGGCGTGCTGCCGTTCATGAGCTGCTTTACGGCTCAGCGCTCTTTGATGTCATCCGTTCGCTGTCGGGGGAAGGC
GAGCAACGGCTCCGCCCACATCTGACATTAGCACGCCTCATCCGCAAAGGAATCGCACTCGGGTATTTGCCGACTCGCGC
GCTTGAACTTGTCGGAGGGGGAGAACGATGA
CTGGATGATATCGAACAAGTAGCGAACCGTCTCCTCGCCGAAGCGGTGCAACGCCGCGCCTCTGACCTTCATCTCGTCCC
GCGCCGACATGATGCGATCATTCGCCTCCGCCTTGACGGCATGCTCATCGATGTTGGTACAATCTCGAAAGAAACCGCTG
AACGCGTCATCGTCCATTTCAAATTTTTGGCTGGCATGGATATTGGCGAACGCCGTCGTCCGCAAAGCGGCGCGATGGAA
GTGAATGAGTCCGGGGAAACGGTGTATTTGCGCTTATCCACGCTGCCGACGCTTTATGATGAAAGCCTCGTCATCCGCCT
TCTACCGCAGCGCTTTTCGCTGCCGCTTCGTGAACTATCCTTATTTTCCCACTCCACCGCACGATTGTTTTCCTTTATGC
AGCAGCCACAAGGACTCGTGTTGCTGACCGGCCCAACCGGGTCGGGAAAGACGACGACATTGTATACGCTTCTCGACGTT
TGCCAAGCGGAAAGACAACGTAACATTATCACGTTGGAAGATCCGATTGAAAAGCGGAATGATCGGTTTTTGCAAGTGCA
GATCAATGAAAAAGCAGGTATCACGTATGCAGCCAGCTTGAAAGCCGCTTTGCGCCATGACCCGGATGTGTTAATGGTCG
GCGAGATCCGCGACCATGATACGGCAGCGATCGCCGTACGATCAGCGTTGACAGGGCACTTGGTGGTATCGACCATGCAT
GCTGCTGATGCAGTCGGCGCAGTGTATCGGCTCCATGAGTTCGGGGTGTCTCCCGGCGACTTGGCTGAGACGTTGCTTGC
TGTTTCGGCGCAGCGTCTTGTTGAGCTTCGCTGCCCGCTATGCGGTGACAATTGCCATCCGGCTTGTCGTCGGCTTCAAC
GAAGACGGCGTGCTGCCGTTCATGAGCTGCTTTACGGCTCAGCGCTCTTTGATGTCATCCGTTCGCTGTCGGGGGAAGGC
GAGCAACGGCTCCGCCCACATCTGACATTAGCACGCCTCATCCGCAAAGGAATCGCACTCGGGTATTTGCCGACTCGCGC
GCTTGAACTTGTCGGAGGGGGAGAACGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
51.585 |
97.472 |
0.503 |
| pilB | Glaesserella parasuis strain SC1401 |
37.83 |
95.787 |
0.362 |