Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSQ42_RS07975 Genome accession   NZ_CP150184
Coordinates   1508299..1508883 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus sp. FSL W8-0812     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1503299..1513883
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ42_RS07945 (NSQ42_07945) dapD 1503485..1504195 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSQ42_RS07950 (NSQ42_07950) - 1504265..1505389 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  NSQ42_RS07955 (NSQ42_07955) - 1505451..1505696 (+) 246 WP_003232382.1 YkuS family protein -
  NSQ42_RS07960 (NSQ42_07960) mscT 1505733..1506536 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  NSQ42_RS07965 (NSQ42_07965) ahpA 1506773..1507315 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NSQ42_RS07970 (NSQ42_07970) ykuV 1507387..1507833 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  NSQ42_RS07975 (NSQ42_07975) rok 1508299..1508883 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  NSQ42_RS07980 (NSQ42_07980) cse15 1508924..1509889 (-) 966 WP_015715807.1 spore protein Cse15 -
  NSQ42_RS07985 (NSQ42_07985) - 1510026..1510625 (+) 600 WP_015715808.1 molybdenum cofactor guanylyltransferase -
  NSQ42_RS07990 (NSQ42_07990) - 1510676..1511695 (+) 1020 WP_015715809.1 molybdopterin-synthase adenylyltransferase MoeB -
  NSQ42_RS07995 (NSQ42_07995) glp 1511713..1513005 (+) 1293 WP_015715810.1 gephyrin-like molybdotransferase Glp -
  NSQ42_RS08000 (NSQ42_08000) mobB 1512966..1513487 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=965353 NSQ42_RS07975 WP_014113628.1 1508299..1508883(+) (rok) [Bacillus sp. FSL W8-0812]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=965353 NSQ42_RS07975 WP_014113628.1 1508299..1508883(+) (rok) [Bacillus sp. FSL W8-0812]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment