Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   NSQ42_RS06480 Genome accession   NZ_CP150184
Coordinates   1245204..1245860 (+) Length   218 a.a.
NCBI ID   WP_015383354.1    Uniprot ID   -
Organism   Bacillus sp. FSL W8-0812     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1240204..1250860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ42_RS06450 (NSQ42_06450) oppF 1240669..1241586 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  NSQ42_RS06455 (NSQ42_06455) - 1241692..1242909 (+) 1218 WP_195727929.1 MFS transporter -
  NSQ42_RS06460 (NSQ42_06460) - 1243074..1243652 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  NSQ42_RS06465 (NSQ42_06465) spx 1243833..1244228 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  NSQ42_RS06470 (NSQ42_06470) - 1244271..1244927 (-) 657 WP_003232944.1 TerC family protein -
  NSQ42_RS06475 (NSQ42_06475) - 1245097..1245237 (+) 141 WP_119122854.1 hypothetical protein -
  NSQ42_RS06480 (NSQ42_06480) mecA 1245204..1245860 (+) 657 WP_015383354.1 adaptor protein MecA Regulator
  NSQ42_RS06485 (NSQ42_06485) - 1245855..1245977 (-) 123 WP_003245684.1 hypothetical protein -
  NSQ42_RS06490 (NSQ42_06490) coiA 1246021..1247172 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  NSQ42_RS06495 (NSQ42_06495) pepF 1247402..1249231 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  NSQ42_RS06500 (NSQ42_06500) - 1249269..1249436 (-) 168 WP_003244944.1 hypothetical protein -
  NSQ42_RS06505 (NSQ42_06505) spxH 1249750..1250649 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25749.62 Da        Isoelectric Point: 4.0841

>NTDB_id=965347 NSQ42_RS06480 WP_015383354.1 1245204..1245860(+) (mecA) [Bacillus sp. FSL W8-0812]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=965347 NSQ42_RS06480 WP_015383354.1 1245204..1245860(+) (mecA) [Bacillus sp. FSL W8-0812]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995

Multiple sequence alignment