Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NSQ42_RS04845 Genome accession   NZ_CP150184
Coordinates   941767..942561 (+) Length   264 a.a.
NCBI ID   WP_003233555.1    Uniprot ID   -
Organism   Bacillus sp. FSL W8-0812     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 936767..947561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ42_RS04815 (NSQ42_04815) - 937606..938637 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  NSQ42_RS04820 (NSQ42_04820) - 938752..939633 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  NSQ42_RS04825 (NSQ42_04825) - 939721..940305 (+) 585 WP_003243940.1 nitroreductase -
  NSQ42_RS04830 (NSQ42_04830) - 940344..940535 (-) 192 WP_003233561.1 YfhD family protein -
  NSQ42_RS04835 (NSQ42_04835) - 940602..940712 (-) 111 WP_003223230.1 YfhE family protein -
  NSQ42_RS04840 (NSQ42_04840) - 940767..941678 (-) 912 WP_195727898.1 TIGR01777 family oxidoreductase -
  NSQ42_RS04845 (NSQ42_04845) recX 941767..942561 (+) 795 WP_003233555.1 recombination regulator RecX Regulator
  NSQ42_RS04850 (NSQ42_04850) - 942563..942877 (+) 315 WP_003233553.1 YfhH family protein -
  NSQ42_RS04855 (NSQ42_04855) - 943021..944214 (+) 1194 WP_080010604.1 MFS transporter -
  NSQ42_RS04860 (NSQ42_04860) - 944246..944398 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NSQ42_RS04865 (NSQ42_04865) - 944523..944792 (+) 270 WP_003243789.1 YfhJ family protein -
  NSQ42_RS04870 (NSQ42_04870) - 944937..945455 (+) 519 WP_029726841.1 SH3 domain-containing protein -
  NSQ42_RS04875 (NSQ42_04875) spdL 945540..945857 (+) 318 WP_032679045.1 SdpC immunity protein SpdL -
  NSQ42_RS04880 (NSQ42_04880) ephM 945859..946719 (+) 861 WP_029726839.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31001.22 Da        Isoelectric Point: 6.6686

>NTDB_id=965335 NSQ42_RS04845 WP_003233555.1 941767..942561(+) (recX) [Bacillus sp. FSL W8-0812]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTKE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=965335 NSQ42_RS04845 WP_003233555.1 941767..942561(+) (recX) [Bacillus sp. FSL W8-0812]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATCGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAAGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment