Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   NSQ36_RS14855 Genome accession   NZ_CP150182
Coordinates   2888946..2889587 (-) Length   213 a.a.
NCBI ID   WP_058013793.1    Uniprot ID   A0A2G8IV23
Organism   Bacillus sp. FSL W8-1143     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2883946..2894587
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ36_RS14820 (NSQ36_14820) - 2885078..2885509 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  NSQ36_RS14825 (NSQ36_14825) - 2885509..2885850 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  NSQ36_RS14830 (NSQ36_14830) - 2885843..2887321 (+) 1479 WP_034620106.1 Na+/H+ antiporter subunit D -
  NSQ36_RS14835 (NSQ36_14835) - 2887328..2887807 (+) 480 WP_044140819.1 Na+/H+ antiporter subunit E -
  NSQ36_RS14840 (NSQ36_14840) - 2887807..2888088 (+) 282 WP_003213177.1 Na(+)/H(+) antiporter subunit F1 -
  NSQ36_RS14845 (NSQ36_14845) mnhG 2888072..2888446 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  NSQ36_RS14850 (NSQ36_14850) - 2888533..2888922 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  NSQ36_RS14855 (NSQ36_14855) comA 2888946..2889587 (-) 642 WP_058013793.1 response regulator transcription factor Regulator
  NSQ36_RS14860 (NSQ36_14860) comP 2889668..2891980 (-) 2313 WP_339205994.1 ATP-binding protein Regulator
  NSQ36_RS14865 (NSQ36_14865) comX 2892035..2892205 (-) 171 WP_212045489.1 competence pheromone ComX -
  NSQ36_RS14870 (NSQ36_14870) - 2892202..2893116 (-) 915 WP_310425834.1 polyprenyl synthetase family protein -
  NSQ36_RS14875 (NSQ36_14875) degQ 2893268..2893408 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  NSQ36_RS14880 (NSQ36_14880) - 2893914..2894267 (+) 354 WP_339205997.1 inner spore coat protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24154.55 Da        Isoelectric Point: 4.5688

>NTDB_id=965307 NSQ36_RS14855 WP_058013793.1 2888946..2889587(-) (comA) [Bacillus sp. FSL W8-1143]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNQQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHELLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=965307 NSQ36_RS14855 WP_058013793.1 2888946..2889587(-) (comA) [Bacillus sp. FSL W8-1143]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGATCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTGA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTCTAGAAACCAACCAACAAGTGAAAATCATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCCATTCGGGCTGGATTGCACGGTGCAATTAGTAAAACAGA
GACAAAAGACAAAATTATTGAATACATACACCGCACATTGCAAGGAGAAGTTGTCATTCAGCTATCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAGCCAGAACAGGCGCAGCAGACCGATCACGAGCTGTTAACAGAGCGAGAGTGTTTGATC
CTGAGAGAAGTGGAAAAAGGATACACGAACCAAGAGATTGCCGATGTGCTGCATTTGAGCAAACGCTCGATTGAATACAG
CTTGACGTCCATCTTTAATAAGCTGAATGTTGGCTCTCGAACCGAAGCGGTGTTAATTGCAAAATCTGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2G8IV23

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.495

100

0.718

Multiple sequence alignment