Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSQ36_RS06850 Genome accession   NZ_CP150182
Coordinates   1384066..1384647 (+) Length   193 a.a.
NCBI ID   WP_003210851.1    Uniprot ID   -
Organism   Bacillus sp. FSL W8-1143     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1379066..1389647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ36_RS06820 (NSQ36_06820) dapD 1379188..1379898 (+) 711 WP_106029784.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSQ36_RS06825 (NSQ36_06825) - 1379933..1381111 (+) 1179 WP_339207077.1 N-acetyldiaminopimelate deacetylase -
  NSQ36_RS06830 (NSQ36_06830) - 1381162..1381404 (+) 243 WP_003211408.1 YkuS family protein -
  NSQ36_RS06835 (NSQ36_06835) - 1381434..1382240 (-) 807 WP_339207079.1 mechanosensitive ion channel family protein -
  NSQ36_RS06840 (NSQ36_06840) ahpA 1382512..1383054 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  NSQ36_RS06845 (NSQ36_06845) - 1383137..1383595 (+) 459 WP_003211884.1 TlpA disulfide reductase family protein -
  NSQ36_RS06850 (NSQ36_06850) rok 1384066..1384647 (+) 582 WP_003210851.1 transcriptional regulator Rok Regulator
  NSQ36_RS06855 (NSQ36_06855) - 1384700..1385617 (-) 918 WP_050945137.1 hypothetical protein -
  NSQ36_RS06860 (NSQ36_06860) - 1385702..1386283 (+) 582 WP_050945136.1 molybdenum cofactor guanylyltransferase -
  NSQ36_RS06865 (NSQ36_06865) - 1386314..1387330 (+) 1017 WP_050945135.1 thiazole biosynthesis adenylyltransferase ThiF -
  NSQ36_RS06870 (NSQ36_06870) glp 1387340..1388617 (+) 1278 WP_050945134.1 gephyrin-like molybdotransferase Glp -
  NSQ36_RS06875 (NSQ36_06875) mobB 1388599..1389123 (+) 525 WP_339207082.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NSQ36_RS06880 (NSQ36_06880) - 1389120..1389611 (+) 492 WP_339207085.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21839.83 Da        Isoelectric Point: 9.7310

>NTDB_id=965285 NSQ36_RS06850 WP_003210851.1 1384066..1384647(+) (rok) [Bacillus sp. FSL W8-1143]
MFNEREALRLRLEQLNEAEVKVIREYQIERDTIYAKLRELDRHGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQP
PAQSQSNAVSTLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=965285 NSQ36_RS06850 WP_003210851.1 1384066..1384647(+) (rok) [Bacillus sp. FSL W8-1143]
TTGTTTAATGAGAGGGAAGCGTTACGATTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATACGATTTATGCAAAATTAAGAGAATTAGACCGTCATGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAAAGAAAAACGGATTCACTGCCTGTATTAGCTGAACTGGCTGCACAAGAAATGAGAAGCTACCAGCCG
CCTGCACAATCACAATCAAATGCTGTATCAACTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTCGCCCTGGTTCAAAGGCAGCTAAGCTTCGTGAAGCTGCGATTAAAACGTTAA
AGCGTCATAATGCAGCGATTAAAAGCTCTGAACTTCAAAAAGAAATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTATCCTGAAGTGAAAAAGCCATATCGCGGACAGTATATTTTAGAAGGCGA
TATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.053

98.446

0.798

Multiple sequence alignment