Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NSQ36_RS04260 Genome accession   NZ_CP150182
Coordinates   896027..896818 (+) Length   263 a.a.
NCBI ID   WP_322000558.1    Uniprot ID   -
Organism   Bacillus sp. FSL W8-1143     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 891027..901818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ36_RS04225 (NSQ36_04225) - 891110..891658 (+) 549 WP_003217810.1 thioredoxin family protein -
  NSQ36_RS04230 (NSQ36_04230) - 891995..892462 (+) 468 WP_050944749.1 DUF393 domain-containing protein -
  NSQ36_RS04235 (NSQ36_04235) - 892499..893755 (-) 1257 WP_253622812.1 transcriptional regulator -
  NSQ36_RS04240 (NSQ36_04240) - 894028..894615 (+) 588 WP_003217860.1 nitroreductase -
  NSQ36_RS04245 (NSQ36_04245) - 894656..894811 (-) 156 WP_003217852.1 YfhD family protein -
  NSQ36_RS04250 (NSQ36_04250) - 894873..894983 (-) 111 WP_017358836.1 YfhE family protein -
  NSQ36_RS04255 (NSQ36_04255) - 895036..895932 (-) 897 WP_339206871.1 TIGR01777 family oxidoreductase -
  NSQ36_RS04260 (NSQ36_04260) recX 896027..896818 (+) 792 WP_322000558.1 recombination regulator RecX Regulator
  NSQ36_RS04265 (NSQ36_04265) - 896822..897136 (+) 315 WP_050944744.1 YfhH family protein -
  NSQ36_RS04270 (NSQ36_04270) - 897159..897332 (-) 174 WP_003217811.1 YpzG family protein -
  NSQ36_RS04275 (NSQ36_04275) - 897358..897507 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  NSQ36_RS04280 (NSQ36_04280) - 897624..897896 (+) 273 WP_003217809.1 YfhJ family protein -
  NSQ36_RS04285 (NSQ36_04285) - 898186..899169 (+) 984 WP_003217835.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30610.00 Da        Isoelectric Point: 6.8960

>NTDB_id=965269 NSQ36_RS04260 WP_322000558.1 896027..896818(+) (recX) [Bacillus sp. FSL W8-1143]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIDIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKQYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDNIEQALSQYPDDLQLEE
AVKQVQKLVRKEKNRSAKEIEQRIKLQLQRKGFSFGIIDKALQETYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=965269 NSQ36_RS04260 WP_322000558.1 896027..896818(+) (recX) [Bacillus sp. FSL W8-1143]
ATGCCCTATATTACAAAAATCTCTGCTCAGAAAAACAATACAGAGCGGGTAAACATCTTTCTTGATGAAAAATACGCCTT
TAGCGTGGATCTAGATGTGCTCGTCCAGCACGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATCGACATTC
AATTCGGTGATGCTGTGAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCCTACCGAATGAGATCGGTGAAAGAAGTA
ACCGATTATTTGACGAAAAAAGAAATCCCGGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCAATACAAGTATGT
AAATGATCTTGAATTTGCGGAAGCCTATGTCAGCACCCACCGTAAAACGAACAGCAAAGGGCCGTCCGTCCTGAAAAAAG
AGCTAAAGCTCAAAGGGATAGATGATGACAACATTGAACAAGCACTATCGCAATATCCTGATGACTTACAGCTGGAGGAA
GCTGTGAAGCAGGTTCAGAAGCTTGTGAGAAAAGAAAAAAATCGTTCCGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAACGAAAAGGATTTTCGTTTGGGATCATTGATAAAGCCCTTCAAGAAACCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTCTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGACACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

62.738

100

0.627

Multiple sequence alignment