Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | ACJSOD_RS09650 | Genome accession | NZ_CP174508 |
| Coordinates | 2081084..2081449 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain KS1-2 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2076084..2086449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJSOD_RS09620 (ACJSOD_09620) | pyrR | 2076706..2077218 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| ACJSOD_RS09625 (ACJSOD_09625) | ruvX | 2077330..2077764 (-) | 435 | WP_023098361.1 | Holliday junction resolvase RuvX | - |
| ACJSOD_RS09630 (ACJSOD_09630) | - | 2077764..2078333 (-) | 570 | WP_034020581.1 | YqgE/AlgH family protein | - |
| ACJSOD_RS09635 (ACJSOD_09635) | - | 2078382..2079275 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| ACJSOD_RS09640 (ACJSOD_09640) | gshB | 2079422..2080375 (-) | 954 | WP_042853546.1 | glutathione synthase | - |
| ACJSOD_RS09645 (ACJSOD_09645) | pilG | 2080630..2081037 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| ACJSOD_RS09650 (ACJSOD_09650) | pilH | 2081084..2081449 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| ACJSOD_RS09655 (ACJSOD_09655) | - | 2081500..2082036 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| ACJSOD_RS09660 (ACJSOD_09660) | pilJ | 2082121..2084169 (+) | 2049 | WP_019682428.1 | chemotaxis chemoreceptor PilJ | - |
| ACJSOD_RS09665 (ACJSOD_09665) | pilK | 2084230..2085105 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=965267 ACJSOD_RS09650 WP_003084587.1 2081084..2081449(+) (pilH) [Pseudomonas aeruginosa strain KS1-2]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=965267 ACJSOD_RS09650 WP_003084587.1 2081084..2081449(+) (pilH) [Pseudomonas aeruginosa strain KS1-2]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |