Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NSQ23_RS11670 Genome accession   NZ_CP150179
Coordinates   2181667..2182620 (-) Length   317 a.a.
NCBI ID   WP_192949177.1    Uniprot ID   -
Organism   Anoxybacillus sp. FSL W8-1294     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2176667..2187620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ23_RS11650 (NSQ23_11650) - 2176763..2177485 (-) 723 WP_339170853.1 DUF2268 domain-containing protein -
  NSQ23_RS11655 (NSQ23_11655) - 2177918..2179147 (+) 1230 WP_339170721.1 IS110 family transposase -
  NSQ23_RS11660 (NSQ23_11660) fabF 2179353..2180594 (-) 1242 WP_339170855.1 beta-ketoacyl-ACP synthase II -
  NSQ23_RS11665 (NSQ23_11665) - 2180627..2181559 (-) 933 WP_339170857.1 beta-ketoacyl-ACP synthase III -
  NSQ23_RS11670 (NSQ23_11670) med 2181667..2182620 (-) 954 WP_192949177.1 BMP family ABC transporter substrate-binding protein Regulator
  NSQ23_RS11675 (NSQ23_11675) - 2182939..2183118 (+) 180 WP_064220507.1 YjzD family protein -
  NSQ23_RS11680 (NSQ23_11680) clpB 2183144..2185726 (-) 2583 WP_339170858.1 ATP-dependent chaperone ClpB -
  NSQ23_RS11685 (NSQ23_11685) - 2185812..2185991 (-) 180 WP_003395421.1 YjzC family protein -
  NSQ23_RS11690 (NSQ23_11690) argF 2186081..2187025 (-) 945 WP_004891859.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35443.07 Da        Isoelectric Point: 4.6712

>NTDB_id=965190 NSQ23_RS11670 WP_192949177.1 2181667..2182620(-) (med) [Anoxybacillus sp. FSL W8-1294]
MWRYTYLIFALLVILSSCAPAQLSSGHVQKVGLLVPDTIDDQVWGTKGYKGLLRIQAKFGAEVFYREGVNSEAATKQAVK
EFHQKGVKLIFGHGNEYGEYFDDIAEKYPNIHFVFFNGEAKKKNVTSFNLQGHAMGFFGGMVAGHMTKTNNIGVIAAFEW
QPEVDGFFEGALYENENAHVDVEYVQNWDDINTALEIAERMIADGVDVIYPAGDKFSVPIIEKMKEYGLYAIGYVTDQSD
LGERTVLTSTVQHVDALYELVAQKFIDGELTSGTTYVDFQDGVVELGAFSPLVDESFQQKMTKAIERYKKTGKLPNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=965190 NSQ23_RS11670 WP_192949177.1 2181667..2182620(-) (med) [Anoxybacillus sp. FSL W8-1294]
ATGTGGCGATATACATATTTGATTTTTGCACTACTTGTTATATTATCTTCTTGCGCTCCTGCTCAATTATCATCGGGACA
TGTACAAAAGGTTGGTTTGCTCGTTCCGGATACGATCGACGATCAAGTGTGGGGAACGAAAGGATATAAAGGGTTGCTTC
GTATTCAAGCGAAGTTTGGCGCTGAAGTGTTTTATCGGGAGGGTGTGAACTCGGAAGCGGCCACAAAACAGGCGGTAAAA
GAGTTTCATCAAAAAGGCGTTAAGTTAATTTTCGGGCACGGAAACGAATATGGGGAATATTTTGATGACATCGCGGAAAA
ATATCCGAACATACATTTTGTATTTTTTAACGGAGAGGCGAAAAAGAAAAACGTCACAAGCTTCAATCTCCAAGGACATG
CGATGGGCTTTTTTGGAGGCATGGTCGCAGGACATATGACGAAAACGAATAACATTGGCGTGATTGCCGCATTTGAATGG
CAGCCGGAAGTGGACGGTTTTTTCGAAGGAGCGTTATATGAAAACGAAAATGCCCATGTCGACGTCGAATATGTGCAAAA
TTGGGATGACATAAATACAGCTTTGGAGATTGCTGAGCGGATGATCGCAGATGGCGTAGATGTCATATACCCAGCTGGCG
ATAAATTTAGCGTACCGATCATTGAAAAAATGAAAGAATATGGGCTTTATGCGATCGGATATGTAACAGACCAATCAGAT
TTAGGGGAACGAACAGTGCTGACAAGCACCGTCCAACATGTCGATGCACTATATGAACTCGTTGCGCAAAAGTTTATCGA
TGGGGAGTTAACGTCAGGAACGACATATGTTGATTTTCAAGACGGTGTCGTTGAACTCGGCGCGTTTAGCCCGCTTGTAG
ATGAATCGTTTCAACAAAAAATGACAAAAGCGATTGAGCGATATAAAAAAACGGGGAAATTGCCGAATGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

55.34

97.476

0.539

Multiple sequence alignment