Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   NSQ23_RS11575 Genome accession   NZ_CP150179
Coordinates   2161593..2163389 (-) Length   598 a.a.
NCBI ID   WP_339170838.1    Uniprot ID   -
Organism   Anoxybacillus sp. FSL W8-1294     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 2156593..2168389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ23_RS11535 (NSQ23_11535) - 2156780..2157571 (-) 792 WP_339170829.1 NAD kinase -
  NSQ23_RS11540 (NSQ23_11540) - 2157578..2158216 (-) 639 WP_128356856.1 GTP pyrophosphokinase family protein -
  NSQ23_RS11545 (NSQ23_11545) - 2158229..2158585 (-) 357 WP_339170831.1 hypothetical protein -
  NSQ23_RS11550 (NSQ23_11550) - 2158713..2159303 (+) 591 WP_004891796.1 CYTH domain-containing protein -
  NSQ23_RS11555 (NSQ23_11555) - 2159300..2159908 (+) 609 WP_339170834.1 lytic transglycosylase domain-containing protein -
  NSQ23_RS11560 (NSQ23_11560) - 2159965..2160369 (+) 405 WP_004891799.1 hypothetical protein -
  NSQ23_RS11565 (NSQ23_11565) - 2160353..2161165 (+) 813 WP_339170835.1 ClpXP adapter SpxH family protein -
  NSQ23_RS11570 (NSQ23_11570) - 2161404..2161568 (+) 165 WP_339170836.1 hypothetical protein -
  NSQ23_RS11575 (NSQ23_11575) pepF 2161593..2163389 (-) 1797 WP_339170838.1 oligoendopeptidase F Regulator
  NSQ23_RS11580 (NSQ23_11580) - 2163427..2164611 (-) 1185 WP_339170840.1 competence protein CoiA family protein -
  NSQ23_RS11585 (NSQ23_11585) mecA 2164836..2165501 (+) 666 WP_004891810.1 adaptor protein MecA -
  NSQ23_RS11590 (NSQ23_11590) cls 2165559..2167067 (+) 1509 WP_339170842.1 cardiolipin synthase -
  NSQ23_RS11595 (NSQ23_11595) spxA 2167080..2167490 (-) 411 WP_004891816.1 transcriptional regulator SpxA -
  NSQ23_RS11600 (NSQ23_11600) - 2167739..2167930 (+) 192 WP_064221108.1 hypothetical protein -

Sequence

Protein


Download         Length: 598 a.a.        Molecular weight: 69676.52 Da        Isoelectric Point: 5.0238

>NTDB_id=965186 NSQ23_RS11575 WP_339170838.1 2161593..2163389(-) (pepF) [Anoxybacillus sp. FSL W8-1294]
MEKTLPTRKDVPVEYTWRLEDIFATDEQWEQEFQQIQALLPKFSEYKGRLGESAQMLYEALQYRDHVFMRLGKLYAYAHM
RHDEDTANSLYQGLETRAEGLYAEAGQATAFIVPEILAMDEDVLRTFLQQYEPLRLYAHELDEMNRQRPHVLSEKEEALL
AQAAEVMNASSNTFGALNNADLRFPTITDENGEEVEVTHGRYIRFLESEDRRVRRDAFKAVYDTYRKYENTFASTLSGAV
KRNNFFARVRNYRSAREAALSKNQIPETVYDNLIETIHRYLPLLHRYVQLRKRVLGLDELHMYDLYTPLVKQVDMKVTYE
EAKDILLKGLTPLGDEYISIVKEGFDNRWVDVQETRGKRSGAYSSGSYGTNPYILMNWQDNVNNLFTLAHEFGHSVHSYY
TRKYQPYPYGNYSIFVAEVASTCNEALLNDYLLKTIDDEKKKLYLLNHYLETFRGTVFRQTMFAEFEHMIHQMAQNGEAL
TAKVLTEKYYELNKTYFGDGVVIDEEIGLEWARIPHFYYNYYVYQYATGFSAATALSKQILEEGTPAVERYIGFLKAGSS
DYPIEVLKKAGVDMTAPEPIEQACQVFEQKLQELEQLL

Nucleotide


Download         Length: 1797 bp        

>NTDB_id=965186 NSQ23_RS11575 WP_339170838.1 2161593..2163389(-) (pepF) [Anoxybacillus sp. FSL W8-1294]
ATGGAAAAAACGTTGCCGACACGTAAAGACGTTCCGGTAGAGTACACATGGCGTCTCGAAGATATTTTCGCAACAGATGA
ACAATGGGAACAAGAATTTCAACAAATTCAAGCACTGCTTCCGAAATTTTCGGAGTATAAAGGCAGATTAGGGGAAAGCG
CACAGATGTTATACGAAGCGTTACAATATCGCGACCATGTGTTCATGCGACTAGGAAAATTATATGCGTACGCACATATG
CGCCATGACGAAGATACGGCTAATTCGCTTTATCAAGGATTGGAAACGAGAGCGGAAGGGTTGTATGCGGAAGCAGGTCA
AGCGACGGCGTTTATCGTGCCAGAAATTTTAGCGATGGATGAAGATGTGTTGCGCACGTTTTTACAACAATACGAGCCGC
TTCGTTTGTATGCGCATGAATTAGATGAAATGAACCGCCAACGTCCGCACGTGTTATCGGAAAAAGAAGAAGCGTTGCTT
GCACAGGCGGCGGAAGTGATGAACGCATCAAGCAATACGTTCGGGGCGTTAAATAATGCTGATTTGCGTTTTCCGACGAT
TACAGATGAAAACGGAGAAGAAGTGGAAGTGACGCACGGCCGTTACATTCGTTTTCTCGAAAGCGAAGATCGCCGCGTCC
GCCGCGATGCATTTAAAGCGGTATACGATACATATCGCAAATATGAAAATACGTTTGCGAGCACGTTAAGCGGAGCGGTG
AAGCGCAATAACTTTTTTGCGCGCGTTCGCAACTATCGCTCAGCGCGCGAGGCGGCATTAAGTAAAAACCAAATTCCTGA
AACGGTGTACGATAACTTAATTGAAACGATTCATCGCTATTTGCCACTTTTGCATCGTTACGTTCAATTGCGCAAGCGCG
TGCTCGGATTAGATGAATTGCATATGTACGATTTATATACGCCGCTTGTCAAACAAGTCGATATGAAAGTGACGTATGAA
GAAGCAAAAGACATATTGTTAAAAGGATTGACGCCACTAGGTGACGAATATATTTCGATCGTGAAAGAAGGGTTTGATAA
CCGTTGGGTTGACGTGCAAGAAACGCGCGGCAAACGAAGTGGAGCGTACTCGTCTGGTTCATATGGAACGAATCCGTACA
TTTTAATGAACTGGCAAGATAATGTGAACAACTTATTTACGCTTGCCCATGAGTTTGGCCATTCGGTGCATAGTTACTAT
ACGCGCAAATATCAGCCGTATCCGTACGGAAACTATTCGATTTTCGTTGCGGAAGTCGCATCGACGTGCAACGAAGCGTT
GTTGAACGATTATTTATTAAAAACGATCGATGACGAGAAGAAAAAGTTATATTTATTAAACCATTATTTAGAAACGTTCC
GAGGGACGGTGTTCCGTCAAACGATGTTTGCGGAGTTTGAACATATGATTCATCAAATGGCACAAAACGGGGAAGCGTTG
ACTGCCAAAGTATTGACGGAAAAATATTATGAGCTAAACAAAACGTATTTCGGGGATGGCGTCGTCATCGATGAAGAAAT
CGGTTTAGAATGGGCGCGCATTCCGCATTTTTACTACAACTATTATGTGTATCAATATGCGACAGGCTTTAGCGCTGCGA
CCGCATTAAGCAAACAAATTTTAGAAGAGGGTACACCTGCGGTTGAACGTTACATTGGATTTTTAAAAGCAGGAAGCTCC
GATTATCCGATTGAAGTGTTGAAAAAAGCAGGTGTCGATATGACAGCGCCTGAGCCGATTGAACAAGCGTGTCAAGTGTT
CGAACAAAAATTACAAGAACTCGAGCAACTATTGTAA

Domains

Predicted by InterProScan.

Oligopeptidase F (Peptidase_M3_N)

(115-184)

Peptidase family M3 (Peptidase_M3)

(206-585)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

48.9

98.829

0.483

Multiple sequence alignment