Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSU05_RS07575 Genome accession   NZ_CP150177
Coordinates   1444920..1445495 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus sp. EU52     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1439920..1450495
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU05_RS07545 (NSU05_07545) dapD 1440107..1440817 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSU05_RS07550 (NSU05_07550) - 1440887..1442011 (+) 1125 WP_038428899.1 N-acetyldiaminopimelate deacetylase -
  NSU05_RS07555 (NSU05_07555) - 1442073..1442318 (+) 246 WP_003232382.1 YkuS family protein -
  NSU05_RS07560 (NSU05_07560) mscT 1442355..1443158 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  NSU05_RS07565 (NSU05_07565) ahpA 1443395..1443937 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NSU05_RS07570 (NSU05_07570) ykuV 1444008..1444454 (+) 447 WP_038428900.1 thiol-disulfide oxidoreductase YkuV -
  NSU05_RS07575 (NSU05_07575) rok 1444920..1445495 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  NSU05_RS07580 (NSU05_07580) cse15 1445536..1446501 (-) 966 WP_029317734.1 spore protein Cse15 -
  NSU05_RS07585 (NSU05_07585) - 1446638..1447237 (+) 600 WP_038428902.1 molybdenum cofactor guanylyltransferase -
  NSU05_RS07590 (NSU05_07590) - 1447288..1448307 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  NSU05_RS07595 (NSU05_07595) glp 1448325..1449617 (+) 1293 WP_038428903.1 gephyrin-like molybdotransferase Glp -
  NSU05_RS07600 (NSU05_07600) mobB 1449578..1450099 (+) 522 WP_046160345.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=965075 NSU05_RS07575 WP_003232378.1 1444920..1445495(+) (rok) [Bacillus sp. EU52]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=965075 NSU05_RS07575 WP_003232378.1 1444920..1445495(+) (rok) [Bacillus sp. EU52]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment