Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NSU05_RS04465 Genome accession   NZ_CP150177
Coordinates   878647..879441 (+) Length   264 a.a.
NCBI ID   WP_038428646.1    Uniprot ID   -
Organism   Bacillus sp. EU52     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 873647..884441
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU05_RS04435 (NSU05_04435) - 874486..875517 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  NSU05_RS04440 (NSU05_04440) - 875632..876513 (+) 882 WP_032723009.1 PhzF family phenazine biosynthesis isomerase -
  NSU05_RS04445 (NSU05_04445) - 876601..877185 (+) 585 WP_003243940.1 nitroreductase -
  NSU05_RS04450 (NSU05_04450) - 877224..877415 (-) 192 WP_038428644.1 YfhD family protein -
  NSU05_RS04455 (NSU05_04455) - 877482..877592 (-) 111 WP_003223230.1 YfhE family protein -
  NSU05_RS04460 (NSU05_04460) - 877647..878558 (-) 912 WP_038428645.1 TIGR01777 family oxidoreductase -
  NSU05_RS04465 (NSU05_04465) recX 878647..879441 (+) 795 WP_038428646.1 recombination regulator RecX Regulator
  NSU05_RS04470 (NSU05_04470) - 879443..879757 (+) 315 WP_038428648.1 YfhH family protein -
  NSU05_RS04475 (NSU05_04475) - 879901..881094 (+) 1194 WP_003243500.1 MFS transporter -
  NSU05_RS04480 (NSU05_04480) - 881126..881278 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NSU05_RS04485 (NSU05_04485) - 881403..881672 (+) 270 WP_003243789.1 YfhJ family protein -
  NSU05_RS04490 (NSU05_04490) - 881817..882335 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  NSU05_RS04495 (NSU05_04495) spdL 882420..882737 (+) 318 WP_038428649.1 SdpC immunity protein SpdL -
  NSU05_RS04500 (NSU05_04500) ephM 882739..883599 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.23 Da        Isoelectric Point: 6.6686

>NTDB_id=965057 NSU05_RS04465 WP_038428646.1 878647..879441(+) (recX) [Bacillus sp. EU52]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=965057 NSU05_RS04465 WP_038428646.1 878647..879441(+) (recX) [Bacillus sp. EU52]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTTAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment